Circumscription of Fulbrightiella gen. nov. and Sherwoodiella gen. nov., Two Novel Genera in the Calotrichaceae (Nostocales, Cyanobacteria)

. 2023 Feb ; 59 (1) : 204-220. [epub] 20221220

Jazyk angličtina Země Spojené státy americké Médium print-electronic

Typ dokumentu časopisecké články, práce podpořená grantem

Perzistentní odkaz   https://www.medvik.cz/link/pmid36331047

Three novel strains in Calotrichaceae from tropical habitats were isolated and characterized with regard to their morphology, phylogenetic placement, and secondary structures of conserved domains in the 16S-23S internal transcribed spacer (ITS). The strains fell into two clades formerly identified as Calothrix from freshwater and brackish habitats. Based on both morphology and ecology, they differed from the type species of Calothrix, C. confervicola, which is marine, has wide trichomes with short cells, and narrows abruptly to a hyaline hair. The first clade grouped species with heteropolar filaments widened at the base and narrowed gradually toward the apex but not ending in a hair, with basal heterocytes that are formed in series as the apically placed heterocytes senesce; this clade is being named Fulbrightiella gen. nov., with two named species, F. bharadwajae sp. nov. and F. oahuensis sp. nov. The second clade was comprised of a single species with isopolar trichomes that are untapering as hormogonia, but which widen midfilament and taper toward both ends following growth. These trichomes develop pairs of heterocyte mid-filament, causing fragmentation into heteropolar trichomes with basal heterocytes and ends that taper, but not to a hair. This clade consists of a single species at present, Sherwoodiella mauiensis. With this action, four clades in the Calotrichaceae have been named: Macrochaete, Dulcicalothrix, Fulbrightiella, and Sherwoodiella. Calothrix sensu stricto is truly marine, morphologically distinct, and unsequenced; finding and sequencing the generitype for Calothrix remains as the most important and unfinished task in the revision of the Calotrichaceae.

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Alvarenga, D. O., Rigonato, J., Branco, L. H. Z., Melo, I. S. & Fiore, M. F. 2016. Phyllonema aviceniicola gen. nov., sp. nov. and Foliisarcina bertiogensis gen. nov., sp. nov., epiphyllic cyanobacteria associated with Avicennia schaueriana leaves. Int. J. Syst. Evol. Microbiol. 66:689-700.

Bennet, A. & Murray, G. 1889. A Handbook of Cryptogamic Botany. Green and Co., London, Longmans, 512 pp.

Berrendero, E., Johansen, J. R., Kaštovsky, J., Bohuncká, M. & Čapková, K. 2016. Macrochaete gen. nov. (Nostocales, Cyanobacteria), a taxon morphologically and molecularly distinct from Calothrix. J. Phycol. 52:638-55.

Berrendero, E., Perona, E. & Mateo, P. 2008. Genetic and morphological characterization of Rivularia and Calothrix (Nostocales, Cyanobacteria) from running water. Int. J. Syst. Evol. Microbiol. 58:447-60.

Berrendero, E., Perona, E. & Mateo, P. 2011. Phenotypic variability and phylogenetic relationships of the genera Tolypothrix and Calothrix (Nostocales, Cyanobacteria) from running water. Int. J. Syst. Evol. Microbiol. 61:3039-51.

Bohunická, M., Johansen, J. R. & Fučíková, K. 2011. Tapinothrix clintonii sp. nov. (Pseudanabaenaceae, Cyanobacteria), a new species at the nexus of five genera. Fottea 11:127-40.

Bohunická, M., Pietrasiak, N., Johansen, J. R., Berrendero-Gomez, E., Hauer, T., Gaysina, L. & Lukešová, A. 2015. Roholtiella, gen. nov. (Nostocales, Cyanobacteria) - a tapering and branching member of the Nostocaceae (Cyanobacteria). Phytotaxa 197:84-103.

Bornet, E. & Flahault, C. 1886. Revision des Nostocacées hétérocystées contenues dans les principaux herbiers de France. Ann. Sci. Nat. Bot. Septième Ser. 3:323-81.

Carmichael, W. W. 1986. Isolation, culture, and toxicity testing of freshwater cyanobacteria (blue-green algae). In Shilov, V. [Ed.] Fundamental Research in Homogenous Catalysis, Vol. 3. Gordon and Breach, New York, pp. 1249-62.

Darriba, D., Taboada, G. L., Doallo, R. & Posada, D. 2012. jModelTest 2: More models, new heuristics and parallel computing. Nat. Methods 9:772.

Dominguez-Escobar, J., Beltrán, Y., Bergman, N. B., Díez, B., Ininbergs, K., Souza, V. & Falcón, L. I. 2011. Phylogenetic and molecular clock inferences of cyanobacterial strains within Rivulariaceae from distant environments. FEMS Microbiol. Lett. 316:90-9.

Flechtner, V. R., Boyer, S. L., Johansen, J. R. & DeNoble, M. L. 2002. Spirirestis rafaelensis gen. et sp. nov. (Cyanophyceae), a new cyanobacterial genus from arid soils. Nova Hedwigia 74:1-24.

Gardner, N. L. 1932. The Myxophyceae of Porto Rico and the Virgin Islands. In Scientific Survey of Porto Rico and the Virgin Islands, Vol. VIII, part 1. Botany of Porto Rico and the Virgin Islands, New York Academy of Sciences, New York, pp. 249-311 +2 plates.

Geitler, L. 1932. Cyanophyceae. In Rabenhorst, L. [Ed.] Reprinted 1985Krytogamen-Flora von Deutschland, Österreich und der Schweiz. Koeltz Scientific Books, Königstein, Germany, p. 1196.

Geitler, L. 1942. Schizophyta: Klasse Schizophyceae. In Engler, A. & Prantl, K. [Eds.] Die natürlichen Pflanzenfamilien, Vol. 1b, Sweite Auflage edition. Wilhelm Engelmann, Leipzig, pp. 1-232.

González-Resendiz, L., Johansen, J. R., Alba-Lois, L., Segal-Kischinevzky, C., Escobar-Sánchez, V., Jimenez-Garcia, L. F., Hauer, T. & León-Tejera, H. 2018a. Nunduva, a new marine genus of Rivulariaceae (Nostocales, Cyanobacteria) from marine tropical rocky shores. Fottea 18:86-105.

González-Resendiz, L., Johansen, J. R., Escobar-Sánchez, V., Segal-Kischinevzky, C., Jiménez-García, L. F. & León-Tejera, H. 2018b. Two new species of Phyllonema (Rivulariaceae, Cyanobacteria) with an emendation of the genus. J. Phycol. 54:638-52.

Hauer, T., Bohunická, M., Johansen, J. R., Mareš, J. & Berrendero, E. 2014. Reassessment of the cyanobacterial family Microchaetaceae and establishment of new families Tolypothrichaceae and Godleyaceae. J. Phycol. 50:1089-100.

Hauer, T., Bohunická, M. & Mühlsteinová, R. 2013. Calochaete gen. nov. (Cyanobacteria, Nostocales), a new cyanobacterial type from the “páramo” zone in Costa Rica. Phytotaxa 109:36-44.

Henson, B. J., Hesselbrock, S. M., Watson, L. E. & Barnum, S. R. 2004. Molecular phylogeny of the heterocytous cyanobacteria (subsections IV and V) based on nifD. Int. J. Syst. Evol. Microbiol. 54:493-7.

Johansen, J. R., González-Resendiz, L., Escobar-Sánchez, V., Segal-Kischinevzky, C., Martínez-Yerena, J., Hernández-Sánchez, J., Hernández-Pérez, G. & León-Tejera, H. 2021. When will taxonomic saturation be achieved? A case study in Nunduva and Kyrtuthrix (Rivulariaceae, Cyanobacteria). J. Phycol. 57:1699-720.

Johansen, J. R., Kovacik, L., Casamatta, D. A., Fučíková, K. & Kaštovský, J. 2011. Utility of 16S-23S ITS sequence and secondary structure for recognition of intrageneric and intergeneric limits within cyanobacterial taxa: Leptolyngbya corticola sp. nov. (Pseudanabaenaceae, Cyanobacteria). Nova Hedwigia 92:283-302.

Komárek, J. 2013. Cyanoprokaryota, Teil 3. Heterocytous genera. In Büdel, L. B., Gärtner, G., Krienetz, L. & Schagerl, M. [Eds.] Süßwasserflora von Mitteleuropa. 19/3, Springer, Heidelberg, Germany, p. 1130.

Komárek, J., Kaštovský, J., Mareš, J. & Johansen, J. R. 2014. Taxonomic classification of cyanoprokaryotes (cyanobacterial genera) 2014 according to the polyphasic approach. Preslia 86:295-335.

León-Tejera, H., González-Resendiz, L., Johansen, J. R., Segal-Kischinevzky, C., Escobar-Sánchez, V. & Alba-Lois, L. 2016. Phylogenetic position reevaluation of Kyrtuthrix and description of a new species K. huatulcensis from Mexico's Pacific coast. Phytotaxa 278:1-18.

Nübel, U., Garcia-Pichel, F. & Muyzer, G. 1997. PCR primers to amplify 16S rRNA genes from cyanobacteria. Appl. Environ. Microbiol. 63:3327-32.

Ronquist, F., Teslenko, M., Van der Mark, P., Ayers, D. L., Darling, A., Hohna, S., Largety, B., Liu, L., Suchard, M. A. & Huelsenbeck, J. P. 2012. MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space. Syst. Biol. 61:539-42.

Saraf, A., Dawda, H. G., Suradkar, A., Batule, P., Behere, I., Kotulkar, M., Kumat, A. & Singh, P. 2018. Insights into the phylogeny of false-branching heterocytous cyanobacteria with the description of Scytonema pachmarhiense sp. nov. isolated from Pachmarhi Biosphere Reserve, India. FEMS Microbiol. Lett. 365:fny160.

Saraf, A., Suradkar, A., Dawda, H. G., Gaysina, L. A., Gabidullin, Y., Kumat, A., Behere, I., Kotulkar, M., Batule, P. & Singh, P. 2019. Phylogenetic complexities of the members of Rivulariaceae with the re-creation of the family Calotrichaceae and description of Dulcicalothrix necridiiformans gen nov., sp nov., and reclassification of Calothrix desertica. FEMS Microbiol. Lett. 366:fnz219.

Shalygin, S., Pietrasiak, N., Gomez, F., Mlewski, C., Gerard, E. & Johansen, J. R. 2018. Rivularia halophila sp. nov. (Nostocales, Cyanobacteria): the first species of Rivularia described with the modern polyphasic approach. Eur. J. Phycol. 53:537-48.

Shalygin, S., Shalygina, R., Johansen, J. R., Pietrasiak, N., Berrendero, E., Bohunická, M. & Sheil, C. A. 2017. Cyanomargarita gen. nov. (Nostocales, Cyanobacteria): convergent evolution resulting in a cryptic genus. J. Phycol. 53:762-77.

Sihvonen, L. M., Lyra, C., Fewer, D. P., Rajaniemi-Wacklin, P., Lehtimäki, J. M., Wahlsten, M. & Sivonen, K. 2007. Strains of the cyanobacterial genera Calothrix and Rivularia isolated from the Baltic Sea display cryptic diversity and are distantly related to Gloeotrichia and Tolypothrix. FEMS Microbiol. Ecol. 61:74-84.

Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. & Kumar, S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28:2731-9.

Turland, N. J., Wiersema, J. H., Barrie, F. R., Greuter, W., Hawksworth, D. L., Herendeen, P. S., Knapp, S. et al. 2018. International Code of Nomenclature for algae, fungi, and plants (Shenzhen Code) adopted by the Nineteenth International Botanical Congress, Shenzhen, China, July 2017. Regnum Vegetabile, 159. Koeltz, Glash€utten, 254pp.

Rippka, R., Deruelles, J., Waterbury, J. B., Herdman, M. & Stanier, R. Y. 1979. Generic assignments, strain histories and properties of pure cultures of cyanobacteria. Microbiol. 111:1-61.

Vaccarino, M. A. & Johansen, J. R. 2011. Scytonematopsis contorta sp. nov. (Nostocales), a new species from the Hawaiian Islands. Fottea 11:149-61.

Whitton, B. A. 1987. The biology of the Rivulariaceae. In Fay, P. & Baalen, C. V. [Eds.] The Cyanobacteria: A Comprehensive Review. Elsevier, Amsterdam, pp. 513-34.

Whitton, B. A. 1992. Diversity, ecology and taxonomy of the cyanobacteria. In Mann, N. H. & Carr, N. G. [Eds.] Photosynthetic Prokaryotes. Biotechnology Handbooks, Plenum, London, pp. 1-51.

Whitton, B. A. 2002. Phylum Cyanophyta (Cyanobacteria). In John, D. M., Whitton, B. A. & Brook, A. J. [Eds.] The Freshwater Algal Flora of the British Isles. Cambridge University Press, Cambridge, An Identification Guide to Freshwater and Terrestrial Algae, pp. 25-122.

Whitton, B. A. & Mateo, P. 2012. Rivulariaceae. In Whitton, B. A. [Ed.] Ecology of Cyanobacteria II. Their Diversity in Space and Time. Springer, Dordrecht, South Holland, pp. 561-91.

Whitton, B. A. & Potts, M. 2000. Introduction of cyanobacteria. In Whitton, B. A. & Potts, M. [Eds.] The Ecology of Cyanobacteria. Their Diversity in Time and Space, Dordrecht, South Holland, pp. 1-10.

Wilmotte, A., Van der Auwera, G. & De Wachter, R. 1993. Structure of the 16S ribosomal RNA of the thermophilic cyanobacterium Chlorogloeopsis HTF (“Mastigocladus laminosus HTF”) strain PCC7518, and phylogenetic analysis. FEBS Lett. 317:96-100.

Zuker, M. 2003. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31:3406-15.

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