Molecular characterization of the type species of Kyrtuthrix (Rivulariaceae, Cyanobacteriota) with comparison to Nunduva: Morphologically different but molecularly cryptic genera

. 2025 Oct ; 61 (5) : 1274-1287. [epub] 20250728

Jazyk angličtina Země Spojené státy americké Médium print-electronic

Typ dokumentu časopisecké články

Perzistentní odkaz   https://www.medvik.cz/link/pmid40719612

Grantová podpora
15-11912S Grant Agency of the Czech Republic
22-06374S Grant Agency of the Czech Republic

The euendolithic genus Kyrtuthrix was originally described in 1929 by A. Ercegović from the Dalmatian coast. Due to its isopolar filaments, Kyrtuthrix was classified within the cyanobacterial system as part of the family Scytonemataceae, even though trichomes tapering toward their ends represent a feature typical of the family Rivulariaceae. In the last decade, four new species of Kyrtuthrix have been described. Their sequences helped to establish Kyrtuthrix as belonging to the family Rivulariaceae. However, the new species demonstrated that Kyrtuthrix was not always euendolithic, as the new discoveries occurred on igneous rocks that were not susceptible to penetration by cyanobacteria. We were able to obtain sequences of the 16S rRNA gene, the 16S-23S ITS rRNA region, the rpoC1 gene, and rbcLX gene for phylogenetic analyses of two classical species of Kyrtuthrix-the type species K. dalmatica collected from the Dalmatian coast and K. maculans collected from the Pacific coast of Peru. Our analyses revealed that both taxa were related to the newly described Kyrtuthrix species, although they were not clearly separated by molecular character sets from the more recently described Nunduva. A third Kyrtuthrix species from the coast of France was characterized by us during this study but was intermediate in morphological structure and phylogeny between K. dalmatica and K. maculans and not given a specific epithet. If we relied on the 16S rRNA gene sequence evidence, Nunduva would have been collapsed into the older genus Kyrtuthrix. However, using multiple gene evidence, they formed sister clades and, therefore, have been treated as distinct genera in this manuscript.

Zobrazit více v PubMed

Aguilera, A. , Berrendero Gómez, E. , Kaštovský, J. , Echenique, R. O. , & Salerno, G. L. (2018). The polyphasic analysis of two native

Alvarenga, D. O. , Andreote, A. P. D. , Branco, L. H. Z. , Delbaje, E. , Cruz, R. B. , de Mello Varani, A. , & Fiore, M. F. (2021). PubMed

Ayres, D. L. , Darling, A. , Zwickl, D. J. , Beerli, P. , Holder, M. T. , Lewis, P. O. , Huelsenbeck, J. P. , Ronquist, F. , Swofford, D. L. , Cummings, M. P. , Rambaut, A. , & Suchard, M. A. (2012). BEAGLE: An application programming interface for statistical phylogenetics. Systematic Biology, 61, 170–173. PubMed PMC

Bohunická, M. , Johansen, J. R. , Villanueva, C. D. , Mareš, J. , Štenclová, L. , Becerra‐Absalón, I. , Hauer, T. , & Kaštovský, J. (2024). Revision of the pantropical genus

Brandes, M. , Albach, D. C. , Vogt, J. C. , Mayland‐Quellhorst, E. , Mendieta‐Leiva, G. , Golubic, S. , & Palinska, K. A. (2015). Supratidal extremophiles‐cyanobacterial diversity in the rock pools of the Croatian Adria. Microbial Ecology, 70, 876–888. PubMed

Ercegović, A. (1929). Sur quelques nouveaux types des Cyanophycées lithophytes de la coteadriatique. Archiv für Protistenkunde, 66, 164–174.

Gelman, A. , & Rubin, D. B. (1992). Inference from iterative simulation using multiple sequences. Statistical Science, 7, 157–511.

Golubic, S. , & LeCampion‐Alsumard, T. (1973). Boring behavior of marine blue‐green algae

González‐Resendiz, L. , Johansen, J. R. , Alba‐Lois, L. , Segal‐Kischinevzky, C. , Escobar‐Sanchez, V. , Garcia, L. F. J. , Hauer, T. , & Leon‐Tereja, H. (2018).

Hauerová, R. , Hauer, T. , Kaštovský, J. , Komárek, J. , Lepšová‐Skácelová, O. , & Mareš, J. (2021). PubMed

Huelsenbeck, J. P. , & Ronquist, F. (2001). MRBAYES: Bayesian inference of phylogeny. Bioinformatics, 17, 754–755. PubMed

Johansen, J. R. , González‐Resendiz, L. , Escobar‐Sánchez, V. , Segal‐Kischinevzky, C. , Martínez‐Yerena, J. , Hernández‐Sánchez, J. , Hernández‐Pérez, G. , & León‐Tejera, H. (2021). When will taxonomic saturation be achieved? A case study in PubMed

Jusko, B. M. , & Johansen, J. R. (2024). Description of six new cyanobacterial species from soil biocrusts on San Nicolas Island, California, in three genera previously restricted to Brazil. Journal of Phycology, 60, 133–151. PubMed

Kaštovský, J. , & Johansen, J. R. (2008).

Komárek, J. (2013). Cyanoprokaryota: Part 3. Heterocytous genera. Gustav Fischer.

Kumar, N. , Saraf, A. , Pal, S. , Mishra, D. , Singh, P. , & Johansen, J. R. (2022). Circumscription of PubMed

León‐Tejera, H. , Gonzalez‐Resendiz, L. , Johansen, J. R. , Segal‐Kischinevzky, C. , Escobar‐Sanchez, V. , & Alba‐Lois, L. (2016). Phylogenetic position re‐evaluation of

Mai, T. , Johansen, J. R. , Pietrasiak, N. , Bohunická, M. , & Martin, M. P. (2018). Revision of the Synechococcales (cyanobacteria) through recognition of four families including Oculatellaceae fam. nov. and Trichocoleaceae fam. nov. and six new genera containing 14 species. Phytotaxa, 325(1), 1–59.

Mareš, J. , Lara, Y. , Dadakova, I. , Hauer, T. , Uher, B. , Wilmotte, A. , & Kaštovský, J. (2015). Phylogenetic analysis of cultivation‐resistant terrestrial cyanobacteria with massive sheaths ( PubMed

McGregor, G. B. , Sendall, B. C. , Niiyama, Y. , Tuji, A. , & Willis, A. (2023). PubMed

Montoya Terreros, H. (2003). Poblaciones naturales y de cultivo del alga marina

Mühlsteinová, R. , Hauer, T. , De Lay, P. , & Petrasiak, N. (2018). Seeking the true

Pietrasiak, N. , Osorio‐Santos, K. , Lipson, D. L. , & Johansen, J. R. (2021). PubMed

Pietrasiak, N. , Osorio‐Santos, K. , Shalygin, S. , Martin, M. P. , & Johansen, J. R. (2019). When is a lineage a species? A case study in PubMed

Řeháková, K. , Johansen, J. R. , Casamatta, D. A. , Xueson, L. , & Vincent, J. (2007). Morphological and molecular characterization of selected desert soil cyanobacteria: Three species new to science including

Rudi, K. , Skulberg, O. M. , & Jakobsen, K. S. (1998). Evolution of cyanobacteria by exchange of genetic material among phyletically related strains. Journal of Bacteriology, 180(13), 3453–3461. PubMed PMC

Saraf, A. , Singh, P. , Kumar, N. , Pal, S. , & Johansen, J. R. (2024). Two new species of PubMed

Seo, P. S. , & Yokota, A. (2003). The phylogenetic relationships of cyanobacteria inferred from 16S rRNA, gyrB, rpoC1 and rpoD1 gene sequences. Journal of General and Applied Microbiology, 49(3), 191–203. PubMed

Shalygin, S. , Kavulic, K. J. , Pietrasiak, N. , Bohunická, M. , Vaccarino, M. A. , Chesarino, M. N. , & Johansen, J. R. (2019). Neotypification of

Silva, S. M. F. , & Pienaar, R. N. (2000). The genus

Stamatakis, A. (2014). RAxML version 8: A tool for phylogenetic analysis and post‐analysis of large phylogenies. Bioinformatics, 30, 1312–1313. PubMed PMC

Stucken, K. , John, U. , Cembella, A. , Murillo, A. A. , Soto‐Liebe, K. , Fuentes‐Valdés, J. J. , Friedel, M. , Plominsky, A. M. , Vásquez, M. , & Glöckner, G. (2010). The smallest known genomes of multicellular and toxic cyanobacteria: Comparison, minimal gene sets for linked traits and the evolutionary implications. PLoS ONE, 5(2), e9235. PubMed PMC

Swofford, D. L. (2002). PAUP* 4.0 beta 8 phylogenetic analysis using parsimony (and other Methods). Sinauer Associates.

Umezaki, I. (1958). Revision of

Villanueva, C. D. , Bohunická, M. , & Johansen, J. R. (2024). We're doing it wrong: Putting homology before phylogeny in cyanobacterial taxonomy. Journal of Phycology, 60, 1071–1089. PubMed

Vondrášková, A. , Fibich, P. , Lepš, J. , & Kaštovský, J. (2017). Determinants of cyanobacterial species composition in the splash zone of two Croatian islands. European Journal of Phycology, 52, 179–187.

Vondrášková, A. , Hauer, T. , Bengtsson, R. , Kaštovský, J. , & Johansen, J. R. (2024). Molecular characterization of two cyanobacterial generitypes from their type localities in Scandinavia. Journal of Phycology, 61, 119–131. PubMed PMC

West, W. , West, G. S. , Reinbold, T. , Gomont, M. , & Schmidt, J. (1901). Part IV. Fresh water Chlorophyceae –marine algae (Chlorophyceae, Phaeophyceae, Dictyotales, Rhodophyceae) – Myxophyceae Hormogoneae – Peridiniales. Botanisk Tidsskrift, 24(2), 157–221.

Zuker, M. (2003). Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Research, 31(13), 3406–3415. PubMed PMC

Zobrazit více v PubMed

RefSeq
PQ627892, PQ627887, PQ627893, PQ627894, PQ625366, PQ625368, PQ625362, PQ627901, PQ627895, PQ625370, PQ625365, PQ608605, PQ608611, PQ608610, PQ625364, PQ625363, PQ625369

Najít záznam

Citační ukazatele

Pouze přihlášení uživatelé

Možnosti archivace

Nahrávání dat ...