• This record comes from PubMed

Anaeramoeba pumila sp. nov. and Anaeramoeba sp. OCE22C represent two novel types of symbiosis of Anaeramoebae and prokaryotes

. 2024 Jan-Feb ; 71 (1) : e13008. [epub] 20231106

Language English Country United States Media print-electronic

Document type Journal Article, Research Support, Non-U.S. Gov't

Grant support
21-30563S Czech Science Foundation
60323 Charles University Grant Agency
SVV 260686/2023 Institutional research support grant of the Charles University

Anaeramoebae is a recently described phylum of anaerobic, marine amoebae, and amoeboflagellates belonging to the Metamonada supergroup. So far, six species have been described based on light microscopic morphology and sequences of the SSU rRNA gene. Here we present three new strains of Anaeramoeba with a description of their morphology, ultrastructure, and phylogenetic position based on the analysis of SSU rRNA gene sequences. Two of the strains represent a new species, Anaeramoeba pumila sp. nov., that has the smallest cells of all known Anaeramoeba species, and one that represents a species from the newly recognized Anaeramoeba flamelloides complex. Anaeramoebae are known to have a syntrophic relationship with prokaryotes. Our strains display two novel, remarkable types of symbioses, previously unknown from Anaeramoebae.

See more in PubMed

Hall, T. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucleic Acids Symposium Series, 41, 95-98.

Jerlström-Hultqvist, J., Gallot-Lavallée, L., Salas-Leiva, D.E., Curtis, B.A., Záhonová, K., Čepička, I. et al. (2023) A unique symbiosome in an anaerobic single-celled eukaryote. bioRxiv, 2023-03.

Katoh, K., Misawa, K., Kuma, K.I. & Miyata, T. (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research, 30, 3059-3066.

Medlin, L., Elwood, H.J., Stickel, S. & Sogin, M.L. (1988) The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions. Gene, 7, 491-499.

Pasulka, A.L., Levin, L.A., Steele, J.A., Case, D.H., Landry, M.R. & Orphan, V.J. (2016) Microbial eukaryotic distributions and diversity patterns in a deep-sea methane seep ecosystem. Environmental Microbiology, 18, 3022-3043.

Ronquist, F., Teslenko, M., Van Der Mark, P., Ayres, D.L., Darling, A., Höhna, S. et al. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology, 61, 539-542.

Stairs, W.C., Táborský, P., Salomaki, D.E., Kolisko, M., Pánek, T., Eme, L. et al. (2021) Anaeramoebae are a divergent lineage of eukaryotes that shed light on the transition from anaerobic mitochondria to hydrogenosome. Current Biology, 31, 5606-5612.e5.

Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 22, 2688-2690.

Stamatakis, A. (2014) RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics, 30, 1312-1313.

Stoeck, T. & Epstein, S. (2003) Novel eukaryotic lineages inferred from small-subunit rRNA analyses of oxygen-depleted marine environments. Applied and Environmental Microbiology, 69, 2657-2663.

Táborský, P., Pánek, T. & Čepička, I. (2017) Anaeramoebidae fam. Nov., a novel lineage of anaerobic amoebae and amoeboflagellates of uncertain phylogenetic position. Protist, 168, 807-831.

See more in PubMed

RefSeq
OQ924550, OQ924553, OQ924551

Find record

Citation metrics

Loading data ...

Archiving options

Loading data ...