Inhibitory interactions of the 2,3-dihydro-6,7-dihydroxy-1H-isoindol-1-one scaffold with Bunyavirales cap-snatching endonucleases expose relevant drug design features
Language English Country France Media print-electronic
Document type Journal Article
PubMed
38735150
DOI
10.1016/j.ejmech.2024.116467
PII: S0223-5234(24)00347-7
Knihovny.cz E-resources
- Keywords
- Bunyavirales, Cap-snatching endonuclease inhibitor, Isoindolinone scaffold, Metal chelation, Pan-antivirals,
- MeSH
- Antiviral Agents pharmacology chemistry chemical synthesis MeSH
- Bunyaviridae drug effects metabolism MeSH
- Endonucleases * metabolism antagonists & inhibitors MeSH
- Enzyme Inhibitors pharmacology chemistry chemical synthesis MeSH
- Isoindoles chemical synthesis pharmacology chemistry MeSH
- Humans MeSH
- Molecular Structure MeSH
- Drug Design * MeSH
- Molecular Docking Simulation * MeSH
- Dose-Response Relationship, Drug MeSH
- Structure-Activity Relationship MeSH
- Check Tag
- Humans MeSH
- Publication type
- Journal Article MeSH
- Names of Substances
- Antiviral Agents MeSH
- Endonucleases * MeSH
- Enzyme Inhibitors MeSH
- Isoindoles MeSH
The World Health Organization (WHO) identifies several bunyaviruses as significant threats to global public health security. Developing effective therapies against these viruses is crucial to combat future outbreaks and mitigate their impact on patient outcomes. Here, we report the synthesis of some isoindol-1-one derivatives and explore their inhibitory properties over an indispensable metal-dependent cap-snatching endonuclease (Cap-ENDO) shared among evolutionary divergent bunyaviruses. The compounds suppressed RNA hydrolysis by Cap-ENDOs, with IC50 values predominantly in the lower μM range. Molecular docking studies revealed the interactions with metal ions to be essential for the 2,3-dihydro-6,7-dihydroxy-1H-isoindol-1-one scaffold activity. Calorimetric analysis uncovered Mn2+ ions to have the highest affinity for sites within the targets, irrespective of aminoacidic variations influencing metal cofactor preferences. Interestingly, spectrophotometric findings unveiled sole dinuclear species formation between the scaffold and Mn2+. Moreover, the complexation of two Mn2+ ions within the viral enzymes appears to be favourable, as indicated by the binding of compound 11 to TOSV Cap-ENDO (Kd = 28 ± 3 μM). Additionally, the tendency of compound 11 to stabilize His+ more than His- Cap-ENDOs suggests exploitable differences in their catalytic pockets relevant to improving specificity. Collectively, our results underscore the isoindolinone scaffold's potential as a strategic starting point for the design of pan-antibunyavirus drugs.
Department of Food and Drug University of Parma Viale delle Scienze 27 A 43124 Parma Italy
Department of Organic Chemistry University of Chemistry and Technology 16628 Prague Czech Republic
Department of Virology Bernhard Nocht Institute for Tropical Medicine Hamburg Germany
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