Endosome rupture enables enteroviruses from the family Picornaviridae to infect cells
Jazyk angličtina Země Velká Británie, Anglie Médium electronic
Typ dokumentu časopisecké články
PubMed
39511383
PubMed Central
PMC11543853
DOI
10.1038/s42003-024-07147-9
PII: 10.1038/s42003-024-07147-9
Knihovny.cz E-zdroje
- MeSH
- buněčná membrána ultrastruktura virologie MeSH
- Cercopithecus aethiops MeSH
- COS buňky MeSH
- cytoplazma virologie MeSH
- elektronová kryomikroskopie MeSH
- endocytóza * MeSH
- endozomy * patologie virologie MeSH
- HeLa buňky MeSH
- lidé MeSH
- makrolidy farmakologie MeSH
- pikornavirové infekce * virologie MeSH
- Rhinovirus * genetika fyziologie MeSH
- zvířata MeSH
- Check Tag
- lidé MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- Názvy látek
- bafilomycin A1 MeSH Prohlížeč
- makrolidy MeSH
Membrane penetration by non-enveloped viruses is diverse and generally not well understood. Enteroviruses, one of the largest groups of non-enveloped viruses, cause diseases ranging from the common cold to life-threatening encephalitis. Enteroviruses enter cells by receptor-mediated endocytosis. However, how enterovirus particles or RNA genomes cross the endosome membrane into the cytoplasm remains unknown. Here we used cryo-electron tomography of infected cells to show that endosomes containing enteroviruses deform, rupture, and release the virus particles into the cytoplasm. Blocking endosome acidification with bafilomycin A1 reduced the number of particles that released their genomes, but did not prevent them from reaching the cytoplasm. Inhibiting post-endocytic membrane remodeling with wiskostatin promoted abortive enterovirus genome release in endosomes. The rupture of endosomes also occurs in control cells and after the endocytosis of very low-density lipoprotein. In summary, our results show that cellular membrane remodeling disrupts enterovirus-containing endosomes and thus releases the virus particles into the cytoplasm to initiate infection. Since the studied enteroviruses employ different receptors for cell entry but are delivered into the cytoplasm by cell-mediated endosome disruption, it is likely that most if not all enteroviruses, and probably numerous other viruses from the family Picornaviridae, can utilize endosome rupture to infect cells.
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Fendrick, A. M., Monto, A. S., Nightengale, B. & Sarnes, M. The economic burden of non-influenza-related viral respiratory tract infection in the United States. PubMed DOI
Norder, H. et al. Picornavirus non-structural proteins as targets for new anti-virals with broad activity. PubMed DOI
Alexander, J. P. Jr, Baden, L., Pallansch, M. A. & Anderson, L. J. Enterovirus 71 infections and neurologic disease-United States, 1977–1991. PubMed DOI
Tuthill, T. J., Groppelli, E., Hogle, J. M. & Rowlands, D. J. Picornaviruses. PubMed PMC
Rossmann, M. G. et al. Structure of a human common cold virus and functional relationship to other picornaviruses. PubMed DOI
Hogle, J. M., Chow, M. & Filman, D. J. Three-dimensional structure of poliovirus at 2.9 A resolution. PubMed DOI
Prchla, E., Kuechler, E., Blaas, D. & Fuchs, R. Uncoating of human rhinovirus serotype 2 from late endosomes. PubMed DOI PMC
Blaas, D. Viral entry pathways: the example of common cold viruses. PubMed DOI PMC
Khan, A. G. et al. Human rhinovirus 14 enters rhabdomyosarcoma cells expressing icam-1 by a clathrin-, caveolin-, and flotillin-independent pathway. PubMed DOI PMC
Snyers, L., Zwickl, H. & Blaas, D. Human rhinovirus type 2 is internalized by clathrin-mediated endocytosis. PubMed DOI PMC
Hussain, K. M., Leong, K. L., Ng, M. M. & Chu, J. J. The essential role of clathrin-mediated endocytosis in the infectious entry of human enterovirus 71. PubMed DOI PMC
Madshus, I. H., Sandvig, K., Olsnes, S. & van Deurs, B. Effect of reduced endocytosis induced by hypotonic shock and potassium depletion on the infection of Hep 2 cells by picornaviruses. PubMed DOI
Pelkmans, L. & Helenius, A. Insider information: what viruses tell us about endocytosis. PubMed DOI
Kumari, S., Mg, S. & Mayor, S. Endocytosis unplugged: multiple ways to enter the cell. PubMed DOI PMC
Schober, D., Kronenberger, P., Prchla, E., Blaas, D. & Fuchs, R. Major and minor receptor group human rhinoviruses penetrate from endosomes by different mechanisms. PubMed DOI PMC
Uncapher, C. R., DeWitt, C. M. & Colonno, R. J. The major and minor group receptor families contain all but one human rhinovirus serotype. PubMed DOI
Hofer, F. et al. Members of the low density lipoprotein receptor family mediate cell entry of a minor-group common cold virus. PubMed DOI PMC
Greve, J. M. et al. The major human rhinovirus receptor is ICAM-1. PubMed DOI
Nishimura, Y. et al. Human P-selectin glycoprotein ligand-1 is a functional receptor for enterovirus 71. PubMed DOI
Yamayoshi, S. et al. Scavenger receptor B2 is a cellular receptor for enterovirus 71. PubMed DOI
Yamayoshi, S., Fujii, K. & Koike, S. Receptors for enterovirus 71. PubMed DOI PMC
Morosky, S. et al. The neonatal Fc receptor is a pan-echovirus receptor. PubMed DOI PMC
Vandesande, H. et al. Early Entry Events in Echovirus 30 Infection. PubMed DOI PMC
Bayer, N. et al. Effect of bafilomycin A1 and nocodazole on endocytic transport in HeLa cells: implications for viral uncoating and infection. PubMed DOI PMC
Drose, S. & Altendorf, K. Bafilomycins and concanamycins as inhibitors of V-ATPases and P-ATPases. PubMed DOI
Garriga, D. et al. Insights into minor group rhinovirus uncoating: the X-ray structure of the HRV2 empty capsid. PubMed DOI PMC
Ren, J. et al. Picornavirus uncoating intermediate captured in atomic detail. PubMed DOI PMC
Buchta, D. et al. Enterovirus particles expel capsid pentamers to enable genome release. PubMed DOI PMC
Wang, X. et al. A sensor-adaptor mechanism for enterovirus uncoating from structures of EV71. PubMed DOI PMC
Pickl-Herk, A. et al. Uncoating of common cold virus is preceded by RNA switching as determined by X-ray and cryo-EM analyses of the subviral A-particle. PubMed DOI PMC
Shingler, K. L. et al. The enterovirus 71 A-particle forms a gateway to allow genome release: a cryoEM study of picornavirus uncoating. PubMed DOI PMC
Hewat, E. A., Neumann, E. & Blaas, D. The concerted conformational changes during human rhinovirus 2 uncoating. PubMed DOI
Hrebik, D. et al. ICAM-1 induced rearrangements of capsid and genome prime rhinovirus 14 for activation and uncoating. PubMed DOI PMC
Fuchs, R. & Blaas, D. Productive entry pathways of human rhinoviruses. PubMed DOI PMC
Brabec, M. et al. Opening of size-selective pores in endosomes during human rhinovirus serotype 2 in vivo uncoating monitored by single-organelle flow analysis. PubMed DOI PMC
Blacklow, S. C. Catching the common cold. PubMed DOI
Kumar, M. & Blaas, D. Human rhinovirus subviral a particle binds to lipid membranes over a twofold axis of icosahedral symmetry. PubMed DOI PMC
Davis, M. P. et al. Recombinant VP4 of human rhinovirus induces permeability in model membranes. PubMed DOI PMC
Bubeck, D. et al. The structure of the poliovirus 135S cell entry intermediate at 10-angstrom resolution reveals the location of an externalized polypeptide that binds to membranes. PubMed DOI PMC
Bubeck, D., Filman, D. J. & Hogle, J. M. Cryo-electron microscopy reconstruction of a poliovirus-receptor-membrane complex. PubMed DOI PMC
Strauss, M., Levy, H. C., Bostina, M., Filman, D. J. & Hogle, J. M. RNA transfer from poliovirus 135S particles across membranes is mediated by long umbilical connectors. PubMed DOI PMC
Panjwani, A. et al. Capsid protein VP4 of human rhinovirus induces membrane permeability by the formation of a size-selective multimeric pore. PubMed DOI PMC
Lonberg-Holm, K., Gosser, L. B. & Shimshick, E. J. Interaction of liposomes with subviral particles of poliovirus type 2 and rhinovirus type 2. PubMed DOI PMC
Groppelli, E. et al. Picornavirus RNA is protected from cleavage by ribonuclease during virion uncoating and transfer across cellular and model membranes. PubMed DOI PMC
Zauner, W., Blaas, D., Kuechler, E. & Wagner, E. Rhinovirus-mediated endosomal release of transfection complexes. PubMed DOI PMC
Vlasak, M., Goesler, I. & Blaas, D. Human rhinovirus type 89 variants use heparan sulfate proteoglycan for cell attachment. PubMed DOI PMC
Zhao, Z. & Michaely, P. The role of calcium in lipoprotein release by the low-density lipoprotein receptor. PubMed DOI PMC
Huang, S., Henry, L., Ho, Y. K., Pownall, H. J. & Rudenko, G. Mechanism of LDL binding and release probed by structure-based mutagenesis of the LDL receptor. PubMed DOI PMC
Beglova, N. & Blacklow, S. C. The LDL receptor: how acid pulls the trigger. PubMed DOI
Arias-Moreno, X., Velazquez-Campoy, A., Rodriguez, J. C., Pocovi, M. & Sancho, J. Mechanism of low density lipoprotein (LDL) release in the endosome: implications of the stability and Ca2+ affinity of the fifth binding module of the LDL receptor. PubMed DOI
Konecsni, T. et al. Low pH-triggered beta-propeller switch of the low-density lipoprotein receptor assists rhinovirus infection. PubMed DOI PMC
Fricks, C. E. & Hogle, J. M. Cell-induced conformational change in poliovirus: externalization of the amino terminus of VP1 is responsible for liposome binding. PubMed DOI PMC
Hendry, E. et al. The crystal structure of coxsackievirus A9: new insights into the uncoating mechanisms of enteroviruses. PubMed DOI
Ilca, S. L. et al. Localized reconstruction of subunits from electron cryomicroscopy images of macromolecular complexes. PubMed DOI PMC
Tuthill, T. J., Bubeck, D., Rowlands, D. J. & Hogle, J. M. Characterization of early steps in the poliovirus infection process: Receptor-decorated liposomes induce conversion of the virus to membrane-anchored entry-intermediate particles. PubMed DOI PMC
Tosteson, M. T. & Chow, M. Characterization of the ion channels formed by poliovirus in planar lipid membranes. PubMed DOI PMC
Brandenburg, B. et al. Imaging poliovirus entry in live cells. PubMed DOI PMC
Danthi, P., Tosteson, M., Li, Q. H. & Chow, M. Genome delivery and ion channel properties are altered in VP4 mutants of poliovirus. PubMed DOI PMC
Bostina, M., Levy, H., Filman, D. J. & Hogle, J. M. Poliovirus RNA is released from the capsid near a twofold symmetry axis. PubMed DOI PMC
Mayor, S., Presley, J. F. & Maxfield, F. R. Sorting of membrane components from endosomes and subsequent recycling to the cell surface occurs by a bulk flow process. PubMed DOI PMC
Naslavsky, N. & Caplan, S. The enigmatic endosome - sorting the ins and outs of endocytic trafficking. PubMed DOI PMC
Grant, B. D. & Donaldson, J. G. Pathways and mechanisms of endocytic recycling. PubMed DOI PMC
Williams, R. L. & Urbe, S. The emerging shape of the ESCRT machinery. PubMed DOI
Seaman, M. N. The retromer complex - endosomal protein recycling and beyond. PubMed PMC
McNally, K. E. et al. Retriever is a multiprotein complex for retromer-independent endosomal cargo recycling. PubMed DOI PMC
Soulet, F., Yarar, D., Leonard, M. & Schmid, S. L. SNX9 regulates dynamin assembly and is required for efficient clathrin-mediated endocytosis. PubMed DOI PMC
Taunton, J. et al. Actin-dependent propulsion of endosomes and lysosomes by recruitment of N-WASP. PubMed DOI PMC
Merrifield, C. J., Qualmann, B., Kessels, M. M. & Almers, W. Neural Wiskott Aldrich Syndrome Protein (N-WASP) and the Arp2/3 complex are recruited to sites of clathrin-mediated endocytosis in cultured fibroblasts. PubMed DOI
Duleh, S. N. & Welch, M. D. WASH and the Arp2/3 complex regulate endosome shape and trafficking. PubMed DOI PMC
Wandinger-Ness, A. & Zerial, M. Rab proteins and the compartmentalization of the endosomal system. PubMed DOI PMC
Apodaca, G. Endocytic traffic in polarized epithelial cells: role of the actin and microtubule cytoskeleton. PubMed DOI
Schwerdt, C. E. & Fogh, J. The ratio of physical particles per infectious unit observed for poliomyelitis viruses. PubMed DOI
Flint, S. J.
Buttner, C. R., Spurny, R., Fuzik, T. & Plevka, P. Cryo-electron microscopy and image classification reveal the existence and structure of the coxsackievirus A6 virion. PubMed DOI PMC
Panjwani, A., Asfor, A. S. & Tuthill, T. J. The conserved N-terminus of human rhinovirus capsid protein VP4 contains membrane pore-forming activity and is a target for neutralizing antibodies. PubMed DOI PMC
Thelen, A. M. & Zoncu, R. Emerging Roles for the Lysosome in Lipid Metabolism. PubMed DOI PMC
Peterson, J. R. et al. Chemical inhibition of N-WASP by stabilization of a native autoinhibited conformation. PubMed DOI
Peterson, J. R., Lokey, R. S., Mitchison, T. J. & Kirschner, M. W. A chemical inhibitor of N-WASP reveals a new mechanism for targeting protein interactions. PubMed DOI PMC
Guerriero, C. J. & Weisz, O. A. N-WASP inhibitor wiskostatin nonselectively perturbs membrane transport by decreasing cellular ATP levels. PubMed DOI
Gupta, S. K., Haigh, B. J., Griffin, F. J. & Wheeler, T. T. The mammalian secreted RNases: mechanisms of action in host defence. PubMed DOI
Lee, H. et al. The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs. PubMed DOI PMC
Huotari, J. & Helenius, A. Endosome maturation. PubMed DOI PMC
Mounce, B. C. et al. Inhibition of Polyamine Biosynthesis Is a Broad-Spectrum Strategy against RNA Viruses. PubMed DOI PMC
Robinson, M. S., Watts, C. & Zerial, M. Membrane dynamics in endocytosis. PubMed DOI
Salo, R. J. & Cliver, D. O. Effect of acid pH, salts, and temperature on the infectivity and physical integrity of enteroviruses. PubMed DOI
Fuzik, T., Moravcova, J., Kalynych, S. & Plevka, P. Structure of Human Enterovirus 70 and Its Inhibition by Capsid-Binding Compounds. PubMed DOI PMC
De Palma, A. M., Vliegen, I., De Clercq, E. & Neyts, J. Selective inhibitors of picornavirus replication. PubMed DOI
Plevka, P. et al. Structure of human enterovirus 71 in complex with a capsid-binding inhibitor. PubMed DOI PMC
Martikainen, M. et al. Hydrophobic pocket targeting probes for enteroviruses. PubMed DOI
Lentz, K. N. et al. Structure of poliovirus type 2 Lansing complexed with antiviral agent SCH48973: comparison of the structural and biological properties of three poliovirus serotypes. PubMed DOI
Gruenberger, M., Pevear, D., Diana, G. D., Kuechler, E. & Blaas, D. Stabilization of human rhinovirus serotype 2 against pH-induced conformational change by antiviral compounds. PubMed DOI
Zeichhardt, H., Otto, M. J., McKinlay, M. A., Willingmann, P. & Habermehl, K. O. Inhibition of poliovirus uncoating by disoxaril (WIN 51711). PubMed DOI
Badger, J. et al. Structural analysis of a series of antiviral agents complexed with human rhinovirus 14. PubMed DOI PMC
Pevear, D. C. et al. Conformational change in the floor of the human rhinovirus canyon blocks adsorption to HeLa cell receptors. PubMed DOI PMC
Grant, R. A. et al. Structures of poliovirus complexes with anti-viral drugs: implications for viral stability and drug design. PubMed DOI
Smith, T. J. et al. The site of attachment in human rhinovirus 14 for antiviral agents that inhibit uncoating. PubMed DOI
Fox, M. P., Otto, M. J. & McKinlay, M. A. Prevention of rhinovirus and poliovirus uncoating by WIN 51711, a new antiviral drug. PubMed DOI PMC
Verdaguer, N., Blaas, D. & Fita, I. Structure of human rhinovirus serotype 2 (HRV2). PubMed DOI
Neubauer, C., Frasel, L., Kuechler, E. & Blaas, D. Mechanism of entry of human rhinovirus 2 into HeLa cells. PubMed DOI
Yoshimori, T., Yamamoto, A., Moriyama, Y., Futai, M. & Tashiro, Y. Bafilomycin A1, a specific inhibitor of vacuolar-type H(+)-ATPase, inhibits acidification and protein degradation in lysosomes of cultured cells. PubMed DOI
Bayer, N., Prchla, E., Schwab, M., Blaas, D. & Fuchs, R. Human rhinovirus HRV14 uncoats from early endosomes in the presence of bafilomycin. PubMed DOI
McMinn, P. et al. Phylogenetic analysis of enterovirus 71 strains isolated during linked epidemics in Malaysia, Singapore, and Western Australia. PubMed DOI PMC
Livak, K. J. & Schmittgen, T. D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. PubMed DOI
Mastronarde, D. N. Automated electron microscope tomography using robust prediction of specimen movements. PubMed DOI
Hagen, W. J. H., Wan, W. & Briggs, J. A. G. Implementation of a cryo-electron tomography tilt-scheme optimized for high resolution subtomogram averaging. PubMed DOI PMC
Zheng, S. Q. et al. MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy. PubMed DOI PMC
Kremer, J. R., Mastronarde, D. N. & McIntosh, J. R. Computer visualization of three-dimensional image data using IMOD. PubMed DOI
Bepler, T., Kelley, K., Noble, A. J. & Berger, B. Topaz-Denoise: general deep denoising models for cryoEM and cryoET. PubMed DOI PMC
Goddard, T. D. et al. UCSF ChimeraX: Meeting modern challenges in visualization and analysis. PubMed DOI PMC
Zhang, C., Lai, C. L. & Pettitt, B. M. Accelerating the weighted histogram analysis method by direct inversion in the iterative subspace. PubMed DOI PMC
Zhang, K. Gctf: Real-time CTF determination and correction. PubMed DOI PMC
Wagner, T. et al. SPHIRE-crYOLO is a fast and accurate fully automated particle picker for cryo-EM. PubMed DOI PMC
Scheres, S. H. A Bayesian view on cryo-EM structure determination. PubMed DOI PMC
Scheres, S. H., Nunez-Ramirez, R., Sorzano, C. O., Carazo, J. M. & Marabini, R. Image processing for electron microscopy single-particle analysis using XMIPP. PubMed DOI PMC
Kleywegt, G. J. & Jones, T. A. xdlMAPMAN and xdlDATAMAN - programs for reformatting, analysis and manipulation of biomacromolecular electron-density maps and reflection data sets. PubMed DOI
Tang, G. et al. EMAN2: an extensible image processing suite for electron microscopy. PubMed DOI
Pettersen, E. F. et al. UCSF Chimera-a visualization system for exploratory research and analysis. PubMed DOI
Adams, P. D. et al. PHENIX: a comprehensive Python-based system for macromolecular structure solution. PubMed DOI PMC
Zhang, X. et al. Structures and stabilization of kinetoplastid-specific split rRNAs revealed by comparing leishmanial and human ribosomes. PubMed DOI PMC
Foster, H. E., Ventura Santos, C. & Carter, A. P. A cryo-ET survey of microtubules and intracellular compartments in mammalian axons. PubMed DOI PMC
Himes, B. A. & Zhang, P. emClarity: software for high-resolution cryo-electron tomography and subtomogram averaging. PubMed DOI PMC