Molecular Biophysics Database (MBDB) makes raw measurements findable and reusable

. 2025 Aug 10 ; () : . [epub] 20250810

Status Publisher Jazyk angličtina Země Německo Médium print-electronic

Typ dokumentu časopisecké články

Perzistentní odkaz   https://www.medvik.cz/link/pmid40783896

Grantová podpora
101004806 Horizon 2020 Framework Programme
LM2023042 Ministerstvo Školství, Mládeže a Tělovýchovy
CZ.02.01.01/00/23_014/0008787 Ministerstvo Školství, Mládeže a Tělovýchovy
86652036 Akademie Věd České Republiky

Odkazy

PubMed 40783896
DOI 10.1007/s00249-025-01789-1
PII: 10.1007/s00249-025-01789-1
Knihovny.cz E-zdroje

Open science is now established as an important paradigm for publicly funded research. The main principle being that to ensure best use of research data and integrity of the scientific process the information from experiments should be made widely and freely available. However, dedicated technical infrastructure to enable useful access to comprehensive experimental information in molecular biophysics is lacking, in particular in regard to repositories for raw measurement data. The Molecular Biophysics Database (MBDB) was created to fill this gap. The MBDB provides a common and extensible framework to store and access raw measurement data from a growing number of biophysical methods, currently including bio-layer interferometry, isothermal titration calorimetry, surface plasmon resonance, and microscale thermophoresis, with additional methods planned for the future. Alongside the raw measurement data from these methods, a rich set of metadata to enable data reuse is captured in accordance with the FAIR data management principles. An overview of the data models and technologies that were used to create the MBDB is presented here.

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