Position-Specific Scoring Matrices [pozičně specifické skórovací matice]

topical
2
Terms

pozičně frekvenční matice
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Position Frequency Matrices
Position Weight Matrices
Position Weight Matrix
Position-Specific Scoring Matrix
Position-Specific Weight Matrices
Position-Specific Weight Matrix
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Sequence Logos

Persistent link   https://www.medvik.cz/link/D056510
Definition

Tabular numerical representations of sequence motifs displaying their variability as likelihood values for each possible residue at each position in a sequence. Position-specific scoring matrices (PSSMs) are calculated from position frequency matrices.

DUI
D056510 MeSH Browser
CUI
M0527620
History note
2010
Public note
2010

E Analytical, Diagnostic and Therapeutic Techniques and Equipment
E05 Investigative Techniques 209
E05.318 Epidemiologic Methods 1 033
E05.318.740 Statistics as Topic 13 112
E05.318.740.600 Probability 275
E05.318.740.600.200 Bayes Theorem 269
E05.318.740.600.300 Hidden Markov Models
E05.318.740.600.400 Likelihood Functions 86
E05.318.740.600.500 Markov Chains 50
E05.318.740.600.600 Odds Ratio 278
E05.318.740.600.650 Position-Specific Scoring Matrices 2
E05.318.740.600.675 Propensity Score 90
E05.318.740.600.700 Proportional Hazards Models 479
E05.318.740.600.800 Risk 2 722
E05.318.740.600.900 Uncertainty 87
E05.393 Genetic Techniques 581
E05.393.760 Sequence Analysis 137
E05.393.760.319 High-Throughput Nucleotide Sequencing 558
E05.393.760.479 Molecular Sequence Annotation 59
E05.393.760.560 Nanopore Sequencing 4
E05.393.760.640 Oligonucleotide Array Sequence Analysis 256
E05.393.760.670 Position-Specific Scoring Matrices 2
E05.393.760.700 Sequence Analysis, DNA 1 484
E05.393.760.705 Sequence Analysis, Protein 44
E05.393.760.710 Sequence Analysis, RNA 119

G Phenomena and Processes
G02 Chemical Phenomena 308
G02.111 Biochemical Phenomena 370
G02.111.570 Molecular Structure 1 339
G02.111.570.580 Conserved Sequence 96
G02.111.570.580.175 Consensus Sequence 20
G02.111.570.580.175.500 Position-Specific Scoring Matrices 2

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