Position-Specific Scoring Matrices [pozičně specifické skórovací matice]

topical
2
Terms

pozičně frekvenční matice
sekvenční logo

 

Position Frequency Matrices
Position Weight Matrices
Position Weight Matrix
Position-Specific Scoring Matrix
Position-Specific Weight Matrices
Position-Specific Weight Matrix
Sequence Logo
Sequence Logos

Persistent link   https://www.medvik.cz/link/D056510
Definition

Tabular numerical representations of sequence motifs displaying their variability as likelihood values for each possible residue at each position in a sequence. Position-specific scoring matrices (PSSMs) are calculated from position frequency matrices.

DUI
D056510 MeSH Browser
CUI
M0527620
History note
2010
Public note
2010

E Analytical, Diagnostic and Therapeutic Techniques and Equipment
E05 Investigative Techniques 209
E05.318 Epidemiologic Methods 1 030
E05.318.740 Statistics as Topic 13 066
E05.318.740.600 Probability 275
E05.318.740.600.200 Bayes Theorem 263
E05.318.740.600.300 Hidden Markov Models
E05.318.740.600.400 Likelihood Functions 85
E05.318.740.600.500 Markov Chains 47
E05.318.740.600.600 Odds Ratio 277
E05.318.740.600.650 Position-Specific Scoring Matrices 2
E05.318.740.600.675 Propensity Score 83
E05.318.740.600.700 Proportional Hazards Models 475
E05.318.740.600.800 Risk 2 681
E05.318.740.600.900 Uncertainty 85
E05.393 Genetic Techniques 579
E05.393.760 Sequence Analysis 135
E05.393.760.319 High-Throughput Nucleotide Sequencing 533
E05.393.760.479 Molecular Sequence Annotation 58
E05.393.760.560 Nanopore Sequencing 4
E05.393.760.640 Oligonucleotide Array Sequence Analysis 256
E05.393.760.670 Position-Specific Scoring Matrices 2
E05.393.760.700 Sequence Analysis, DNA 1 477
E05.393.760.705 Sequence Analysis, Protein 44
E05.393.760.710 Sequence Analysis, RNA 118

G Phenomena and Processes
G02 Chemical Phenomena 307
G02.111 Biochemical Phenomena 370
G02.111.570 Molecular Structure 1 314
G02.111.570.580 Conserved Sequence 95
G02.111.570.580.175 Consensus Sequence 20
G02.111.570.580.175.500 Position-Specific Scoring Matrices 2

Back Add