A single-step TaqMan® RT-qPCR was developed for the detection of bovine viral diarrhea virus type 1 (BVDV-1), an important pathogen of cattle worldwide. The assay was based on conserved 5'UTR sequences of Italian BVDV-1 isolates. In order to establish a diagnostic protocol which simplifies sample collection and processing, the assay was tested on a variety of biological specimens collected from persistently infected calves. The samples analyzed included PBMCs, plasma, dry blood, ear notch and hair bulb. Time and costs required for the analysis of each type of specimen were compared. The RT-qPCR, whose lower limit of detection was 100 copies of viral RNA (1 TCID50), correctly identified all PI animals, irrespective of the type of specimen. The highest copy numbers were obtained from the RNAs extracted from PBMCs, ear notches and hair bulbs. Hair bulb-supernatants directly used as a template allowed identification of all PI animals. In conclusion, based on time and cost evaluation, the most effective and efficient protocol was the one based on the direct analysis of hair bulb-supernatants, avoiding the RNA extraction step.
- MeSH
- bovinní diarea diagnóza virologie MeSH
- kvantitativní polymerázová řetězová reakce metody MeSH
- RNA virová genetika MeSH
- skot MeSH
- Taq-polymerasa genetika metabolismus MeSH
- virus bovinní diarey 1 klasifikace genetika izolace a purifikace MeSH
- zvířata MeSH
- Check Tag
- skot MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- hodnotící studie MeSH
- Geografické názvy
- Itálie MeSH
- MeSH
- bovinní diarea virologie MeSH
- finanční podpora výzkumu jako téma MeSH
- virus bovinní diarey 1 genetika MeSH
- virus bovinní diarey 2 genetika MeSH
- zvířata MeSH
- Check Tag
- zvířata MeSH
- Geografické názvy
- Argentina MeSH
- Brazílie MeSH
- Egypt MeSH
- Finsko MeSH
- Slovenská republika MeSH
