Detail
Článek
Článek online
FT
Medvik - BMČ
  • Je něco špatně v tomto záznamu ?

D-trehalose/D-maltose-binding protein from the hyperthermophilic archaeon Thermococcus litoralis: the binding of trehalose and maltose results in different protein conformational states

Herman P, Staiano M, Marabotti A, Varriale A, Scire A, Tanfani F, Vecer J, Rossi M, D'Auria S.

. 2006 ; 63 (4) : 754-767.

Jazyk angličtina Země Spojené státy americké

Perzistentní odkaz   https://www.medvik.cz/link/bmc07523545
E-zdroje Online

NLK Wiley Online Library (archiv) od 1996-01-01 do 2012-12-31

In this work, we used fluorescence spectroscopy, molecular dynamics simulation, and Fourier transform infrared spectroscopy for investigating the effect of trehalose binding and maltose binding on the structural properties and the physical parameters of the recombinant D-trehalose/D-maltose binding protein (TMBP) from the hyperthermophilic archaeon Thermococcus litoralis. The binding of the two sugars to TMBP was studied in the temperature range 20 degrees-100 degrees C. The results show that TMBP possesses remarkable temperature stability and its secondary structure does not melt up to 90 degrees C. Although both the secondary structure itself and the sequence of melting events were not significantly affected by the sugar binding, the protein assumes different conformations with different physical properties depending whether maltose or trehalose is bound to the protein. At low and moderate temperatures, TMBP possesses a structure that is highly compact both in the absence and in the presence of two sugars. At about 90 degrees C, the structure of the unliganded TMBP partially relaxes whereas both the TMBP/maltose and the TMBP/trehalose complexes remain in the compact state. In addition, Fourier transform infrared results show that the population of alpha-helices exposed to the solvent was smaller in the absence than in the presence of the two sugars. The spectroscopic results are supported by molecular dynamics simulations. Our data on dynamics and stability of TMBP can contribute to a better understanding of transport-related functions of TMBP and constitute ground for targeted modifications of this protein for potential biotechnological applications. 2006 Wiley-Liss, Inc.

000      
00000naa 2200000 a 4500
001      
bmc07523545
003      
CZ-PrNML
005      
20111210135731.0
008      
090520s2006 xxu e eng||
009      
AR
040    __
$a ABA008 $b cze $c ABA008 $d ABA008 $e AACR2
041    0_
$a eng
044    __
$a xxu
100    1_
$a Heřman, Petr, $d 1953- $7 mzk2005317907
245    10
$a D-trehalose/D-maltose-binding protein from the hyperthermophilic archaeon Thermococcus litoralis: the binding of trehalose and maltose results in different protein conformational states / $c Herman P, Staiano M, Marabotti A, Varriale A, Scire A, Tanfani F, Vecer J, Rossi M, D'Auria S.
314    __
$a Faculty of Mathematics and Physics, Institute of Physics, Charles University, Prague, Czech Republic. herman@karlov.mff.cuni.cz
520    9_
$a In this work, we used fluorescence spectroscopy, molecular dynamics simulation, and Fourier transform infrared spectroscopy for investigating the effect of trehalose binding and maltose binding on the structural properties and the physical parameters of the recombinant D-trehalose/D-maltose binding protein (TMBP) from the hyperthermophilic archaeon Thermococcus litoralis. The binding of the two sugars to TMBP was studied in the temperature range 20 degrees-100 degrees C. The results show that TMBP possesses remarkable temperature stability and its secondary structure does not melt up to 90 degrees C. Although both the secondary structure itself and the sequence of melting events were not significantly affected by the sugar binding, the protein assumes different conformations with different physical properties depending whether maltose or trehalose is bound to the protein. At low and moderate temperatures, TMBP possesses a structure that is highly compact both in the absence and in the presence of two sugars. At about 90 degrees C, the structure of the unliganded TMBP partially relaxes whereas both the TMBP/maltose and the TMBP/trehalose complexes remain in the compact state. In addition, Fourier transform infrared results show that the population of alpha-helices exposed to the solvent was smaller in the absence than in the presence of the two sugars. The spectroscopic results are supported by molecular dynamics simulations. Our data on dynamics and stability of TMBP can contribute to a better understanding of transport-related functions of TMBP and constitute ground for targeted modifications of this protein for potential biotechnological applications. 2006 Wiley-Liss, Inc.
650    _2
$a financování organizované $7 D005381
650    _2
$a transportní proteiny $x chemie $x metabolismus $7 D002352
650    _2
$a počítačová simulace $7 D003198
650    _2
$a maltosa $x chemie $x metabolismus $7 D008320
650    _2
$a molekulární modely $7 D008958
650    _2
$a vazba proteinů $7 D011485
650    _2
$a sbalování proteinů $7 D017510
650    _2
$a terciární struktura proteinů $7 D017434
650    _2
$a fluorescenční spektrometrie $7 D013050
650    _2
$a spektrofotometrie infračervená $7 D013055
650    _2
$a substrátová specifita $7 D013379
650    _2
$a teplota $7 D013696
650    _2
$a Thermococcus $x chemie $x metabolismus $7 D019712
650    _2
$a časové faktory $7 D013997
650    _2
$a trehalosa $x chemie $x metabolismus $7 D014199
700    1_
$a Staiano, Maria
700    1_
$a Marabotti, Anna
700    1_
$a Varriale, Antonio
700    1_
$a Scire, Andrea
700    1_
$a Tanfani, Fabio
700    1_
$a Večeř, Jaroslav $7 xx0119411
700    1_
$a Rossi, Mose
700    1_
$a D'Auria, Sabato
773    0_
$w MED00003938 $t Proteins $g Roč. 63, č. 4 (2006), s. 754-767 $x 0887-3585
910    __
$a ABA008 $b x $y 9
990    __
$a 20090506084234 $b ABA008
991    __
$a 20090520145215 $b ABA008
999    __
$a ok $b bmc $g 655583 $s 508893
BAS    __
$a 3
BMC    __
$a 2006 $b 63 $c 4 $d 754-767 $i 0887-3585 $m Proteins $x MED00003938
LZP    __
$a 2009-B2/vtme

Najít záznam

Citační ukazatele

Nahrávání dat ...

Možnosti archivace

Nahrávání dat ...