-
Je něco špatně v tomto záznamu ?
Lipid hydration and mobility: an interplay between fluorescence solvent relaxation experiments and molecular dynamics simulations
P. Jurkiewicz, L. Cwiklik, P. Jungwirth, M. Hof,
Jazyk angličtina Země Francie
Typ dokumentu časopisecké články, práce podpořená grantem, přehledy
- MeSH
- fluorescence MeSH
- lipidové dvojvrstvy MeSH
- lipidy chemie MeSH
- rozpouštědla chemie MeSH
- simulace molekulární dynamiky MeSH
- voda chemie MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- přehledy MeSH
Fluorescence solvent relaxation experiments are based on the characterization of time-dependent shifts in the fluorescence emission of a chromophore, yielding polarity and viscosity information about the chromophore's immediate environment. A chromophore applied to a phospholipid bilayer at a well-defined location (with respect to the z-axis of the bilayer) allows monitoring of the hydration and mobility of the probed segment of the lipid molecules. Specifically, time-resolved fluorescence experiments, fluorescence quenching data and molecular dynamic (MD) simulations show that 6-lauroyl-2-dimethylaminonaphthalene (Laurdan) probes the hydration and mobility of the sn-1 acyl groups in a phosphatidylcholine bilayer. The time-dependent fluorescence shift (TDFS) of Laurdan provides information on headgroup compression and expansion induced by the addition of different amounts of cationic lipids to phosphatidylcholine bilayers. Those changes were predicted by previous MD simulations. Addition of truncated oxidized phospholipids leads to increased mobility and hydration at the sn-1 acyl level. This experimental finding can be explained by MD simulations, which indicate that the truncated chains of the oxidized lipid molecules are looping back into aqueous phase, hence creating voids below the glycerol level. Fluorescence solvent relaxation experiments are also useful in understanding salt effects on the structure and dynamics of lipid bilayers. For example, such experiments demonstrate that large anions increase hydration and mobility at the sn-1 acyl level of phosphatidylcholine bilayers, an observation which could not be explained by standard MD simulations. If polarizability is introduced into the applied force field, however, MD simulations show that big soft polarizable anions are able to interact with the hydrophilic/hydrophobic interface of the lipid bilayer, penetrating to the level probed by Laurdan, and that they expand and destabilize the bilayer making it more hydrated and mobile.
Citace poskytuje Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc12024419
- 003
- CZ-PrNML
- 005
- 20121206114711.0
- 007
- ta
- 008
- 120815s2012 fr f 000 0#eng||
- 009
- AR
- 024 7_
- $a 10.1016/j.biochi.2011.06.027 $2 doi
- 035 __
- $a (PubMed)21740953
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a fr
- 100 1_
- $a Jurkiewicz, P $u J. Heyrovský Institute of Physical Chemistry, Academy of Sciences of the Czech Republic, v. v. i., Dolejškova 3, 18223 Prague 8, Czech Republic. piotr.jurkiewicz@jh-inst.cas.cz
- 245 10
- $a Lipid hydration and mobility: an interplay between fluorescence solvent relaxation experiments and molecular dynamics simulations / $c P. Jurkiewicz, L. Cwiklik, P. Jungwirth, M. Hof,
- 520 9_
- $a Fluorescence solvent relaxation experiments are based on the characterization of time-dependent shifts in the fluorescence emission of a chromophore, yielding polarity and viscosity information about the chromophore's immediate environment. A chromophore applied to a phospholipid bilayer at a well-defined location (with respect to the z-axis of the bilayer) allows monitoring of the hydration and mobility of the probed segment of the lipid molecules. Specifically, time-resolved fluorescence experiments, fluorescence quenching data and molecular dynamic (MD) simulations show that 6-lauroyl-2-dimethylaminonaphthalene (Laurdan) probes the hydration and mobility of the sn-1 acyl groups in a phosphatidylcholine bilayer. The time-dependent fluorescence shift (TDFS) of Laurdan provides information on headgroup compression and expansion induced by the addition of different amounts of cationic lipids to phosphatidylcholine bilayers. Those changes were predicted by previous MD simulations. Addition of truncated oxidized phospholipids leads to increased mobility and hydration at the sn-1 acyl level. This experimental finding can be explained by MD simulations, which indicate that the truncated chains of the oxidized lipid molecules are looping back into aqueous phase, hence creating voids below the glycerol level. Fluorescence solvent relaxation experiments are also useful in understanding salt effects on the structure and dynamics of lipid bilayers. For example, such experiments demonstrate that large anions increase hydration and mobility at the sn-1 acyl level of phosphatidylcholine bilayers, an observation which could not be explained by standard MD simulations. If polarizability is introduced into the applied force field, however, MD simulations show that big soft polarizable anions are able to interact with the hydrophilic/hydrophobic interface of the lipid bilayer, penetrating to the level probed by Laurdan, and that they expand and destabilize the bilayer making it more hydrated and mobile.
- 650 _2
- $a fluorescence $7 D005453
- 650 _2
- $a lipidové dvojvrstvy $7 D008051
- 650 _2
- $a lipidy $x chemie $7 D008055
- 650 _2
- $a simulace molekulární dynamiky $7 D056004
- 650 _2
- $a rozpouštědla $x chemie $7 D012997
- 650 _2
- $a voda $x chemie $7 D014867
- 655 _2
- $a časopisecké články $7 D016428
- 655 _2
- $a práce podpořená grantem $7 D013485
- 655 _2
- $a přehledy $7 D016454
- 700 1_
- $a Cwiklik, L
- 700 1_
- $a Jungwirth, P
- 700 1_
- $a Hof, M
- 773 0_
- $w MED00009325 $t Biochimie $x 1638-6183 $g Roč. 94, č. 1 (2012), s. 26-32
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/21740953 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y m
- 990 __
- $a 20120815 $b ABA008
- 991 __
- $a 20121206114745 $b ABA008
- 999 __
- $a ok $b bmc $g 946567 $s 781747
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2012 $b 94 $c 1 $d 26-32 $i 1638-6183 $m Biochimie $n Biochimie $x MED00009325
- LZP __
- $a Pubmed-20120815/12/02