-
Something wrong with this record ?
Prevalence and diversity of IncX plasmids carrying fluoroquinolone and β-lactam resistance genes in Escherichia coli originating from diverse sources and geographical areas
H. Dobiasova, M. Dolejska,
Language English Country England, Great Britain
Document type Journal Article
Grant support
NT14398
MZ0
CEP Register
Digital library NLK
Full text - Article
Source
NLK
Free Medical Journals
from 1996 to 1 year ago
Open Access Digital Library
from 1996-01-01
PubMed
27165784
DOI
10.1093/jac/dkw144
Knihovny.cz E-resources
- MeSH
- Genes, Bacterial * MeSH
- Drug Resistance, Bacterial * MeSH
- Transformation, Bacterial MeSH
- beta-Lactams pharmacology MeSH
- Global Health MeSH
- Animals, Wild MeSH
- Escherichia coli drug effects genetics isolation & purification MeSH
- Fluoroquinolones pharmacology MeSH
- Genetic Variation MeSH
- Genotype MeSH
- Escherichia coli Infections microbiology veterinary MeSH
- Conjugation, Genetic MeSH
- Humans MeSH
- Molecular Typing MeSH
- Plasmids analysis classification MeSH
- Polymerase Chain Reaction MeSH
- Gene Transfer, Horizontal MeSH
- Prevalence MeSH
- Electrophoresis, Gel, Pulsed-Field MeSH
- Sequence Analysis, DNA MeSH
- Cluster Analysis MeSH
- Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization MeSH
- Animals MeSH
- Check Tag
- Humans MeSH
- Animals MeSH
- Publication type
- Journal Article MeSH
OBJECTIVES: To describe the prevalence and diversity of IncX plasmids with antibiotic resistance genes in Enterobacteriaceae and to identify the most disseminated lineages of the plasmid family. METHODS: IncX plasmids were screened in 1894 Enterobacteriaceae isolates resistant to cefotaxime (2 mg/L) or with reduced susceptibility to ciprofloxacin (0.05 mg/L) obtained from various sources in five continents using PCR. IncX plasmid-harbouring isolates were identified using MALDI-TOF or biochemical tests, and screened for antibiotic resistance genes using PCR and sequencing; their clonality was determined by PFGE. Horizontal transfer of plasmids was tested using transformation and conjugation. IncX plasmids were characterized by S1-nuclease and PFGE, RFLP and hybridization. RESULTS: A total of 164 Escherichia coli isolates (8.7%, n = 1894) carried at least one IncX subgroup. Seven isolates harboured two distinct subgroups. IncX1 subgroup was found in 93 isolates, followed by IncX2 (35 isolates), IncX4 (28) and IncX3 (15). IncX4 plasmids were not transferred horizontally as single plasmids and therefore excluded from further analysis. The most disseminated lineages of IncX plasmids included IncX1 harbouring qnrS1 and blaTEM-1,-135 found in 36 E. coli from different sources in Europe and Australia and IncX2 carrying qnrS1 and tet(A) detected in nine E. coli from wildlife in Europe. IncX3 plasmids harboured predominantly blaSHV-12 and qnrS1 or qnrB7. CONCLUSIONS: IncX plasmids were widely distributed in E. coli from wildlife in Europe and were predominantly associated with fluoroquinolone resistance genes. Plasmids showing indistinguishable restriction profiles were identified in E. coli from different sources and countries suggesting wide dissemination of certain plasmid lineages.
References provided by Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc17031751
- 003
- CZ-PrNML
- 005
- 20190902151857.0
- 007
- ta
- 008
- 171025s2016 enk f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1093/jac/dkw144 $2 doi
- 035 __
- $a (PubMed)27165784
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a enk
- 100 1_
- $a Dobiasova, Hana $u Department of Biology and Wildlife Diseases, Faculty of Veterinary Hygiene and Ecology, University of Veterinary and Pharmaceutical Sciences Brno, Palackeho tr. 1946/1, 612 42 Brno, Czech Republic dobiasova.hanka@gmail.com.
- 245 10
- $a Prevalence and diversity of IncX plasmids carrying fluoroquinolone and β-lactam resistance genes in Escherichia coli originating from diverse sources and geographical areas / $c H. Dobiasova, M. Dolejska,
- 520 9_
- $a OBJECTIVES: To describe the prevalence and diversity of IncX plasmids with antibiotic resistance genes in Enterobacteriaceae and to identify the most disseminated lineages of the plasmid family. METHODS: IncX plasmids were screened in 1894 Enterobacteriaceae isolates resistant to cefotaxime (2 mg/L) or with reduced susceptibility to ciprofloxacin (0.05 mg/L) obtained from various sources in five continents using PCR. IncX plasmid-harbouring isolates were identified using MALDI-TOF or biochemical tests, and screened for antibiotic resistance genes using PCR and sequencing; their clonality was determined by PFGE. Horizontal transfer of plasmids was tested using transformation and conjugation. IncX plasmids were characterized by S1-nuclease and PFGE, RFLP and hybridization. RESULTS: A total of 164 Escherichia coli isolates (8.7%, n = 1894) carried at least one IncX subgroup. Seven isolates harboured two distinct subgroups. IncX1 subgroup was found in 93 isolates, followed by IncX2 (35 isolates), IncX4 (28) and IncX3 (15). IncX4 plasmids were not transferred horizontally as single plasmids and therefore excluded from further analysis. The most disseminated lineages of IncX plasmids included IncX1 harbouring qnrS1 and blaTEM-1,-135 found in 36 E. coli from different sources in Europe and Australia and IncX2 carrying qnrS1 and tet(A) detected in nine E. coli from wildlife in Europe. IncX3 plasmids harboured predominantly blaSHV-12 and qnrS1 or qnrB7. CONCLUSIONS: IncX plasmids were widely distributed in E. coli from wildlife in Europe and were predominantly associated with fluoroquinolone resistance genes. Plasmids showing indistinguishable restriction profiles were identified in E. coli from different sources and countries suggesting wide dissemination of certain plasmid lineages.
- 650 _2
- $a zvířata $7 D000818
- 650 _2
- $a divoká zvířata $7 D000835
- 650 _2
- $a shluková analýza $7 D016000
- 650 _2
- $a konjugace genetická $7 D003227
- 650 12
- $a bakteriální léková rezistence $7 D024881
- 650 _2
- $a pulzní gelová elektroforéza $7 D016521
- 650 _2
- $a Escherichia coli $x účinky léků $x genetika $x izolace a purifikace $7 D004926
- 650 _2
- $a infekce vyvolané Escherichia coli $x mikrobiologie $x veterinární $7 D004927
- 650 _2
- $a fluorochinolony $x farmakologie $7 D024841
- 650 _2
- $a přenos genů horizontální $7 D022761
- 650 12
- $a bakteriální geny $7 D005798
- 650 _2
- $a genetická variace $7 D014644
- 650 _2
- $a genotyp $7 D005838
- 650 _2
- $a celosvětové zdraví $7 D014943
- 650 _2
- $a lidé $7 D006801
- 650 _2
- $a molekulární typizace $7 D058889
- 650 _2
- $a plazmidy $x analýza $x klasifikace $7 D010957
- 650 _2
- $a polymerázová řetězová reakce $7 D016133
- 650 _2
- $a prevalence $7 D015995
- 650 _2
- $a sekvenční analýza DNA $7 D017422
- 650 _2
- $a spektrometrie hmotnostní - ionizace laserem za účasti matrice $7 D019032
- 650 _2
- $a bakteriální transformace $7 D014169
- 650 _2
- $a beta-laktamy $x farmakologie $7 D047090
- 655 _2
- $a časopisecké články $7 D016428
- 700 1_
- $a Dolejská, Monika, $u Department of Biology and Wildlife Diseases, Faculty of Veterinary Hygiene and Ecology, University of Veterinary and Pharmaceutical Sciences Brno, Palackeho tr. 1946/1, 612 42 Brno, Czech Republic Central European Institute of Technology - University of Veterinary and Pharmaceutical Sciences Brno (CEITEC VFU), Palackeho tr. 1946/1, 612 42 Brno, Czech Republic. $d 1982- $7 mub2011634219
- 773 0_
- $w MED00002514 $t The Journal of antimicrobial chemotherapy $x 1460-2091 $g Roč. 71, č. 8 (2016), s. 2118-2124
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/27165784 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y a $z 0
- 990 __
- $a 20171025 $b ABA008
- 991 __
- $a 20190902152225 $b ABA008
- 999 __
- $a ok $b bmc $g 1255344 $s 992778
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2016 $b 71 $c 8 $d 2118-2124 $e 20160510 $i 1460-2091 $m Journal of antimicrobial chemotherapy $n J Antimicrob Chemother $x MED00002514
- GRA __
- $a NT14398 $p MZ0
- LZP __
- $a Pubmed-20171025