-
Je něco špatně v tomto záznamu ?
pHluorin-assisted expression, purification, crystallization and X-ray diffraction data analysis of the C-terminal domain of the HsdR subunit of the Escherichia coli type I restriction-modification system EcoR124I
P. Grinkevich, I. Iermak, NA. Luedtke, JR. Mesters, R. Ettrich, J. Ludwig,
Jazyk angličtina Země Spojené státy americké
Typ dokumentu časopisecké články
NLK
Free Medical Journals
od 2014 do Před 2 roky
PubMed Central
od 2014 do Před 1 rokem
Europe PubMed Central
od 2014 do Před 2 roky
- MeSH
- difrakce rentgenového záření MeSH
- Escherichia coli chemie enzymologie genetika MeSH
- exprese genu MeSH
- klonování DNA MeSH
- krystalizace MeSH
- krystalografie rentgenová MeSH
- plazmidy chemie metabolismus MeSH
- podjednotky proteinů chemie genetika metabolismus MeSH
- proteiny z Escherichia coli chemie genetika metabolismus MeSH
- rekombinantní fúzní proteiny chemie genetika metabolismus MeSH
- restrikční endonukleasy typu I chemie genetika metabolismus MeSH
- sekvence aminokyselin MeSH
- zelené fluorescenční proteiny chemie genetika metabolismus MeSH
- Publikační typ
- časopisecké články MeSH
The HsdR subunit of the type I restriction-modification system EcoR124I is responsible for the translocation as well as the restriction activity of the whole complex consisting of the HsdR, HsdM and HsdS subunits, and while crystal structures are available for the wild type and several mutants, the C-terminal domain comprising approximately 150 residues was not resolved in any of these structures. Here, three fusion constructs with the GFP variant pHluorin developed to overexpress, purify and crystallize the C-terminal domain of HsdR are reported. The shortest of the three encompassed HsdR residues 887-1038 and yielded crystals that belonged to the orthorhombic space group C2221, with unit-cell parameters a = 83.42, b = 176.58, c = 126.03 Å, α = β = γ = 90.00° and two molecules in the asymmetric unit (VM = 2.55 Å(3) Da(-1), solvent content 50.47%). X-ray diffraction data were collected to a resolution of 2.45 Å.
Citace poskytuje Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc18017061
- 003
- CZ-PrNML
- 005
- 20180523131120.0
- 007
- ta
- 008
- 180515s2016 xxu f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1107/S2053230X16011626 $2 doi
- 035 __
- $a (PubMed)27599856
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a xxu
- 100 1_
- $a Grinkevich, Pavel $u Center for Nanobiology and Structural Biology, Institute of Microbiology ASCR, v.v.i., Zamek 136, 37333 Nove Hrady, Czech Republic.
- 245 10
- $a pHluorin-assisted expression, purification, crystallization and X-ray diffraction data analysis of the C-terminal domain of the HsdR subunit of the Escherichia coli type I restriction-modification system EcoR124I / $c P. Grinkevich, I. Iermak, NA. Luedtke, JR. Mesters, R. Ettrich, J. Ludwig,
- 520 9_
- $a The HsdR subunit of the type I restriction-modification system EcoR124I is responsible for the translocation as well as the restriction activity of the whole complex consisting of the HsdR, HsdM and HsdS subunits, and while crystal structures are available for the wild type and several mutants, the C-terminal domain comprising approximately 150 residues was not resolved in any of these structures. Here, three fusion constructs with the GFP variant pHluorin developed to overexpress, purify and crystallize the C-terminal domain of HsdR are reported. The shortest of the three encompassed HsdR residues 887-1038 and yielded crystals that belonged to the orthorhombic space group C2221, with unit-cell parameters a = 83.42, b = 176.58, c = 126.03 Å, α = β = γ = 90.00° and two molecules in the asymmetric unit (VM = 2.55 Å(3) Da(-1), solvent content 50.47%). X-ray diffraction data were collected to a resolution of 2.45 Å.
- 650 _2
- $a sekvence aminokyselin $7 D000595
- 650 _2
- $a klonování DNA $7 D003001
- 650 _2
- $a krystalizace $7 D003460
- 650 _2
- $a krystalografie rentgenová $7 D018360
- 650 _2
- $a restrikční endonukleasy typu I $x chemie $x genetika $x metabolismus $7 D015253
- 650 _2
- $a Escherichia coli $x chemie $x enzymologie $x genetika $7 D004926
- 650 _2
- $a proteiny z Escherichia coli $x chemie $x genetika $x metabolismus $7 D029968
- 650 _2
- $a exprese genu $7 D015870
- 650 _2
- $a zelené fluorescenční proteiny $x chemie $x genetika $x metabolismus $7 D049452
- 650 _2
- $a plazmidy $x chemie $x metabolismus $7 D010957
- 650 _2
- $a podjednotky proteinů $x chemie $x genetika $x metabolismus $7 D021122
- 650 _2
- $a rekombinantní fúzní proteiny $x chemie $x genetika $x metabolismus $7 D011993
- 650 _2
- $a difrakce rentgenového záření $7 D014961
- 655 _2
- $a časopisecké články $7 D016428
- 700 1_
- $a Iermak, Iuliia $u Center for Nanobiology and Structural Biology, Institute of Microbiology ASCR, v.v.i., Zamek 136, 37333 Nove Hrady, Czech Republic.
- 700 1_
- $a Luedtke, Nicholas A $u Center for Nanobiology and Structural Biology, Institute of Microbiology ASCR, v.v.i., Zamek 136, 37333 Nove Hrady, Czech Republic.
- 700 1_
- $a Mesters, Jeroen R $u Institute of Biochemistry, University of Lübeck, Ratzeburger Allee 160, Lübeck, Germany.
- 700 1_
- $a Ettrich, Rüdiger $u Center for Nanobiology and Structural Biology, Institute of Microbiology ASCR, v.v.i., Zamek 136, 37333 Nove Hrady, Czech Republic.
- 700 1_
- $a Ludwig, Jost $u Center for Nanobiology and Structural Biology, Institute of Microbiology ASCR, v.v.i., Zamek 136, 37333 Nove Hrady, Czech Republic.
- 773 0_
- $w MED00189488 $t Acta crystallographica. Section F, Structural biology communications $x 2053-230X $g Roč. 72, č. Pt 9 (2016), s. 672-6
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/27599856 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y a $z 0
- 990 __
- $a 20180515 $b ABA008
- 991 __
- $a 20180523131305 $b ABA008
- 999 __
- $a ok $b bmc $g 1300685 $s 1013901
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2016 $b 72 $c Pt 9 $d 672-6 $e 20160809 $i 2053-230X $m Acta crystallographica. Section F, Structural biology communications $n Acta Crystallogr F Struct Biol Commun $x MED00189488
- LZP __
- $a Pubmed-20180515