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Molecular Characterization of Divergent Closterovirus Isolates Infecting Ribes Species
I. Koloniuk, T. Thekke-Veetil, JS. Reynard, I. Mavrič Pleško, J. Přibylová, J. Brodard, I. Kellenberger, T. Sarkisova, J. Špak, J. Lamovšek, S. Massart, T. Ho, JD. Postman, IE. Tzanetakis,
Jazyk angličtina Země Švýcarsko
Typ dokumentu časopisecké články, práce podpořená grantem, Research Support, U.S. Gov't, Non-P.H.S.
Free Medical Journals od 2009
PubMed Central od 2009
Europe PubMed Central od 2009
ProQuest Central od 2009-01-01
Open Access Digital Library od 2009-01-01
Open Access Digital Library od 2009-01-01
Health & Medicine (ProQuest) od 2009-01-01
ROAD: Directory of Open Access Scholarly Resources od 2009
Odkazy
PubMed
30002359
DOI
10.3390/v10070369
Knihovny.cz E-zdroje
- MeSH
- Closterovirus klasifikace genetika izolace a purifikace ultrastruktura MeSH
- fylogeneze MeSH
- genetická variace MeSH
- genom virový MeSH
- genomika metody MeSH
- nemoci rostlin virologie MeSH
- otevřené čtecí rámce MeSH
- rekombinace genetická MeSH
- Ribes virologie MeSH
- RNA virová MeSH
- sekvence aminokyselin MeSH
- vysoce účinné nukleotidové sekvenování MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Research Support, U.S. Gov't, Non-P.H.S. MeSH
Five isolates of a new member of the family Closteroviridae, tentatively named blackcurrant leafroll-associated virus 1 (BcLRaV-1), were identified in the currant. The 17-kb-long genome codes for 10 putative proteins. The replication-associated polyprotein has several functional domains, including papain-like proteases, methyltransferase, Zemlya, helicase, and RNA-dependent RNA polymerase. Additional open reading frames code for a small protein predicted to integrate into the host cell wall, a heat-shock protein 70 homolog, a heat-shock protein 90 homolog, two coat proteins, and three proteins of unknown functions. Phylogenetic analysis showed that BcLRaV-1 is related to members of the genus Closterovirus, whereas recombination analysis provided evidence of intraspecies recombination.
Agricultural Institute of Slovenia Hacquetova ulica 17 1000 Ljubljana Slovenia
National Clonal Germplasm Repository United States Department of Agriculture Corvallis OR 97333 USA
Virology Phytoplasmology Laboratory Agroscope 1260 Nyon Switzerland
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- $a Koloniuk, Igor $u Department of Plant Virology, Institute of Plant Molecular Biology, Biology Centre of the Academy of Sciences of the Czech Republic, v.v.i., Branišovská 31, 370 05 České Budějovice, Czech Republic. koloniuk@umbr.cas.cz.
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- $a Molecular Characterization of Divergent Closterovirus Isolates Infecting Ribes Species / $c I. Koloniuk, T. Thekke-Veetil, JS. Reynard, I. Mavrič Pleško, J. Přibylová, J. Brodard, I. Kellenberger, T. Sarkisova, J. Špak, J. Lamovšek, S. Massart, T. Ho, JD. Postman, IE. Tzanetakis,
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- $a Five isolates of a new member of the family Closteroviridae, tentatively named blackcurrant leafroll-associated virus 1 (BcLRaV-1), were identified in the currant. The 17-kb-long genome codes for 10 putative proteins. The replication-associated polyprotein has several functional domains, including papain-like proteases, methyltransferase, Zemlya, helicase, and RNA-dependent RNA polymerase. Additional open reading frames code for a small protein predicted to integrate into the host cell wall, a heat-shock protein 70 homolog, a heat-shock protein 90 homolog, two coat proteins, and three proteins of unknown functions. Phylogenetic analysis showed that BcLRaV-1 is related to members of the genus Closterovirus, whereas recombination analysis provided evidence of intraspecies recombination.
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- $a Ho, Thien $u Department of Plant Pathology, Division of Agriculture, University of Arkansas System, Fayetteville, AR 72701, USA. txho@uark.edu.
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