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Molecular Characterization of Divergent Closterovirus Isolates Infecting Ribes Species

I. Koloniuk, T. Thekke-Veetil, JS. Reynard, I. Mavrič Pleško, J. Přibylová, J. Brodard, I. Kellenberger, T. Sarkisova, J. Špak, J. Lamovšek, S. Massart, T. Ho, JD. Postman, IE. Tzanetakis,

. 2018 ; 10 (7) : . [pub] 20180712

Jazyk angličtina Země Švýcarsko

Typ dokumentu časopisecké články, práce podpořená grantem, Research Support, U.S. Gov't, Non-P.H.S.

Perzistentní odkaz   https://www.medvik.cz/link/bmc19000565

Five isolates of a new member of the family Closteroviridae, tentatively named blackcurrant leafroll-associated virus 1 (BcLRaV-1), were identified in the currant. The 17-kb-long genome codes for 10 putative proteins. The replication-associated polyprotein has several functional domains, including papain-like proteases, methyltransferase, Zemlya, helicase, and RNA-dependent RNA polymerase. Additional open reading frames code for a small protein predicted to integrate into the host cell wall, a heat-shock protein 70 homolog, a heat-shock protein 90 homolog, two coat proteins, and three proteins of unknown functions. Phylogenetic analysis showed that BcLRaV-1 is related to members of the genus Closterovirus, whereas recombination analysis provided evidence of intraspecies recombination.

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$a Koloniuk, Igor $u Department of Plant Virology, Institute of Plant Molecular Biology, Biology Centre of the Academy of Sciences of the Czech Republic, v.v.i., Branišovská 31, 370 05 České Budějovice, Czech Republic. koloniuk@umbr.cas.cz.
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$a Molecular Characterization of Divergent Closterovirus Isolates Infecting Ribes Species / $c I. Koloniuk, T. Thekke-Veetil, JS. Reynard, I. Mavrič Pleško, J. Přibylová, J. Brodard, I. Kellenberger, T. Sarkisova, J. Špak, J. Lamovšek, S. Massart, T. Ho, JD. Postman, IE. Tzanetakis,
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$a Five isolates of a new member of the family Closteroviridae, tentatively named blackcurrant leafroll-associated virus 1 (BcLRaV-1), were identified in the currant. The 17-kb-long genome codes for 10 putative proteins. The replication-associated polyprotein has several functional domains, including papain-like proteases, methyltransferase, Zemlya, helicase, and RNA-dependent RNA polymerase. Additional open reading frames code for a small protein predicted to integrate into the host cell wall, a heat-shock protein 70 homolog, a heat-shock protein 90 homolog, two coat proteins, and three proteins of unknown functions. Phylogenetic analysis showed that BcLRaV-1 is related to members of the genus Closterovirus, whereas recombination analysis provided evidence of intraspecies recombination.
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$a Thekke-Veetil, Thanuja $u Department of Plant Pathology, Division of Agriculture, University of Arkansas System, Fayetteville, AR 72701, USA. thanujatv@gmail.com.
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$a Reynard, Jean-Sébastien $u Virology-Phytoplasmology Laboratory, Agroscope, 1260 Nyon, Switzerland. jean-sebastien.reynard@agroscope.admin.ch.
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$a Mavrič Pleško, Irena $u Agricultural Institute of Slovenia, Hacquetova ulica 17, 1000 Ljubljana, Slovenia. irena.mavricplesko@kis.si.
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$a Přibylová, Jaroslava $u Department of Plant Virology, Institute of Plant Molecular Biology, Biology Centre of the Academy of Sciences of the Czech Republic, v.v.i., Branišovská 31, 370 05 České Budějovice, Czech Republic. pribyl@umbr.cas.cz.
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$a Brodard, Justine $u Virology-Phytoplasmology Laboratory, Agroscope, 1260 Nyon, Switzerland. justine.brodard@agroscope.admin.ch.
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$a Kellenberger, Isabelle $u Virology-Phytoplasmology Laboratory, Agroscope, 1260 Nyon, Switzerland. isabelle.kellenberger@agroscope.admin.ch.
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$a Sarkisova, Tatiana $u Department of Plant Virology, Institute of Plant Molecular Biology, Biology Centre of the Academy of Sciences of the Czech Republic, v.v.i., Branišovská 31, 370 05 České Budějovice, Czech Republic. sarkisova@umbr.cas.cz.
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$a Špak, Josef $u Department of Plant Virology, Institute of Plant Molecular Biology, Biology Centre of the Academy of Sciences of the Czech Republic, v.v.i., Branišovská 31, 370 05 České Budějovice, Czech Republic. spak@umbr.cas.cz.
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$a Lamovšek, Janja $u Agricultural Institute of Slovenia, Hacquetova ulica 17, 1000 Ljubljana, Slovenia. janja.lamovsek@kis.si.
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$a Massart, Sebastien $u Plant Pathology Laboratory, TERRA-Gembloux Agro-Bio Tech, University of Liège, Passage des Déportés, 2, 5030 Gembloux, Belgium. sebastien.massart@uliege.be.
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$a Ho, Thien $u Department of Plant Pathology, Division of Agriculture, University of Arkansas System, Fayetteville, AR 72701, USA. txho@uark.edu.
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$a Postman, Joseph D $u National Clonal Germplasm Repository, United States Department of Agriculture, Corvallis, OR 97333, USA. joseph.postman@ars.usda.gov.
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$a Tzanetakis, Ioannis E $u Department of Plant Pathology, Division of Agriculture, University of Arkansas System, Fayetteville, AR 72701, USA. itzaneta@uark.edu.
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