-
Something wrong with this record ?
Phylogeny and biogeography of the African burrowing snake subfamily Aparallactinae (Squamata: Lamprophiidae)
F. Portillo, WR. Branch, W. Conradie, MO. Rödel, J. Penner, MF. Barej, C. Kusamba, WM. Muninga, MM. Aristote, AM. Bauer, JF. Trape, ZT. Nagy, P. Carlino, OSG. Pauwels, M. Menegon, M. Burger, T. Mazuch, K. Jackson, DF. Hughes, M. Behangana, AG....
Language English Country United States
Document type Journal Article, Research Support, N.I.H., Extramural, Research Support, Non-U.S. Gov't, Research Support, U.S. Gov't, Non-P.H.S.
- MeSH
- Phylogeny * MeSH
- Phylogeography * MeSH
- Snakes anatomy & histology genetics MeSH
- Lizards anatomy & histology classification genetics MeSH
- DNA, Mitochondrial genetics MeSH
- Desert Climate * MeSH
- Likelihood Functions MeSH
- Animals MeSH
- Check Tag
- Animals MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Research Support, N.I.H., Extramural MeSH
- Research Support, U.S. Gov't, Non-P.H.S. MeSH
- Geographicals
- Africa South of the Sahara MeSH
Members of the snake subfamily Aparallactinae occur in various habitats throughout sub-Saharan Africa. The monophyly of aparallactine snakes is well established, but relationships within the subfamily are poorly known. We sampled 158 individuals from six of eight aparallactine genera in sub-Saharan Africa. We employed concatenated gene-tree analyses, divergence dating approaches, and ancestral-area reconstructions to infer phylogenies and biogeographic patterns with a multi-locus data set consisting of three mitochondrial (16S, cyt b, and ND4) and two nuclear genes (c-mos and RAG1). As a result, we uncover several cryptic lineages and elevate a lineage of Polemon to full species status. Diversification occurred predominantly during the Miocene, with a few speciation events occurring subsequently in the Pliocene and Pleistocene. Biogeographic analyses suggested that the Zambezian biogeographic region, comprising grasslands and woodlands, facilitated radiations, vicariance, and dispersal for many aparallactines. Moreover, the geographic distributions of many forest species were fragmented during xeric and cooler conditions, which likely led to diversification events. Biogeographic patterns of aparallactine snakes are consistent with previous studies of other sub-Saharan herpetofauna.
Department of Biology Villanova University Villanova PA 19085 USA
Department of Biology Whitman College 345 Boyer Avenue Walla Walla WA 99362 USA
Department of Environmental Sciences Makerere University P O Box 7298 Kampala Uganda
Department of Zoology P O Box 77000 Nelson Mandela University Port Elizabeth 6031 South Africa
Dříteč 65 53305 Czech Republic
Flora Fauna and Man Ecological Services Ltd Tortola British Virgin Islands
Museo di Storia naturale del Salento Sp Calimera Borgagne km1 73021 Calimera Italy
Port Elizabeth Museum P O Box 11347 Humewood 6013 South Africa
References provided by Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc19012771
- 003
- CZ-PrNML
- 005
- 20190405100320.0
- 007
- ta
- 008
- 190405s2018 xxu f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1016/j.ympev.2018.03.019 $2 doi
- 035 __
- $a (PubMed)29551523
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a xxu
- 100 1_
- $a Portillo, Frank $u Department of Biological Sciences, University of Texas at El Paso, 500 W. University Ave., El Paso, TX 79968, USA. Electronic address: fporti15@epcc.edu.
- 245 10
- $a Phylogeny and biogeography of the African burrowing snake subfamily Aparallactinae (Squamata: Lamprophiidae) / $c F. Portillo, WR. Branch, W. Conradie, MO. Rödel, J. Penner, MF. Barej, C. Kusamba, WM. Muninga, MM. Aristote, AM. Bauer, JF. Trape, ZT. Nagy, P. Carlino, OSG. Pauwels, M. Menegon, M. Burger, T. Mazuch, K. Jackson, DF. Hughes, M. Behangana, AG. Zassi-Boulou, E. Greenbaum,
- 520 9_
- $a Members of the snake subfamily Aparallactinae occur in various habitats throughout sub-Saharan Africa. The monophyly of aparallactine snakes is well established, but relationships within the subfamily are poorly known. We sampled 158 individuals from six of eight aparallactine genera in sub-Saharan Africa. We employed concatenated gene-tree analyses, divergence dating approaches, and ancestral-area reconstructions to infer phylogenies and biogeographic patterns with a multi-locus data set consisting of three mitochondrial (16S, cyt b, and ND4) and two nuclear genes (c-mos and RAG1). As a result, we uncover several cryptic lineages and elevate a lineage of Polemon to full species status. Diversification occurred predominantly during the Miocene, with a few speciation events occurring subsequently in the Pliocene and Pleistocene. Biogeographic analyses suggested that the Zambezian biogeographic region, comprising grasslands and woodlands, facilitated radiations, vicariance, and dispersal for many aparallactines. Moreover, the geographic distributions of many forest species were fragmented during xeric and cooler conditions, which likely led to diversification events. Biogeographic patterns of aparallactine snakes are consistent with previous studies of other sub-Saharan herpetofauna.
- 650 _2
- $a zvířata $7 D000818
- 650 _2
- $a mitochondriální DNA $x genetika $7 D004272
- 650 12
- $a pouštní klima $7 D003889
- 650 _2
- $a pravděpodobnostní funkce $7 D016013
- 650 _2
- $a ještěři $x anatomie a histologie $x klasifikace $x genetika $7 D008116
- 650 12
- $a fylogeneze $7 D010802
- 650 12
- $a fylogeografie $7 D058974
- 650 _2
- $a hadi $x anatomie a histologie $x genetika $7 D012911
- 651 _2
- $a subsaharská Afrika $7 D017954
- 655 _2
- $a časopisecké články $7 D016428
- 655 _2
- $a Research Support, N.I.H., Extramural $7 D052061
- 655 _2
- $a práce podpořená grantem $7 D013485
- 655 _2
- $a Research Support, U.S. Gov't, Non-P.H.S. $7 D013486
- 700 1_
- $a Branch, William R $u Port Elizabeth Museum, P.O. Box 11347, Humewood 6013, South Africa; Department of Zoology, P.O. Box 77000, Nelson Mandela University, Port Elizabeth 6031, South Africa.
- 700 1_
- $a Conradie, Werner $u Port Elizabeth Museum, P.O. Box 11347, Humewood 6013, South Africa; School of Natural Resource Management, George Campus, Nelson Mandela Metropolitan University, George 6530, South Africa.
- 700 1_
- $a Rödel, Mark-Oliver $u Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Invalidenstr. 43, 10115 Berlin, Germany.
- 700 1_
- $a Penner, Johannes $u Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Invalidenstr. 43, 10115 Berlin, Germany; Chair of Wildlife Ecology and Wildlife Management, University of Freiburg, Tennenbacher Straße 4, 79106 Freiburg, Germany.
- 700 1_
- $a Barej, Michael F $u Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Invalidenstr. 43, 10115 Berlin, Germany.
- 700 1_
- $a Kusamba, Chifundera $u Laboratoire d'Herpétologie, Département de Biologie, Centre de Recherche en Sciences Naturelles, Lwiro, Democratic Republic of the Congo.
- 700 1_
- $a Muninga, Wandege M $u Laboratoire d'Herpétologie, Département de Biologie, Centre de Recherche en Sciences Naturelles, Lwiro, Democratic Republic of the Congo.
- 700 1_
- $a Aristote, Mwenebatu M $u Institut Superieur d'Ecologie pour la Conservation de la Nature, Katana Campus, Sud Kivu, Democratic Republic of the Congo.
- 700 1_
- $a Bauer, Aaron M $u Department of Biology, Villanova University, Villanova, PA 19085, USA.
- 700 1_
- $a Trape, Jean-François $u Laboratoire de Paludologie et Zoologie Médicale, Institut de Recherche pour le Développement, UMR MIVEGEC, B.P. 1386, Dakar, Senegal.
- 700 1_
- $a Nagy, Zoltán T $u Royal Belgian Institute of Natural Sciences, OD Taxonomy and Phylogeny, Rue Vautier 29, 1000 Brussels, Belgium.
- 700 1_
- $a Carlino, Piero $u Museo di Storia naturale del Salento, Sp. Calimera- Borgagne km1, 73021 Calimera, Italy.
- 700 1_
- $a Pauwels, Olivier S G $u Département des Vertébrés Récents, Institut Royal des Sciences naturelles de Belgique, Rue Vautier 29, 1000 Brussels, Belgium.
- 700 1_
- $a Menegon, Michele $u Division of Biology and Conservation Ecology, School of Science and the Environment, Manchester Metropolitan University, Manchester, UK.
- 700 1_
- $a Burger, Marius $u African Amphibian Conservation Research Group, Unit for Environmental Sciences and Management, North-West University, Potchefstroom 2520, South Africa; Flora Fauna & Man, Ecological Services Ltd. Tortola, British Virgin Islands.
- 700 1_
- $a Mazuch, Tomáš $u Dříteč 65, 53305, Czech Republic.
- 700 1_
- $a Jackson, Kate $u Department of Biology, Whitman College, 345 Boyer Avenue, Walla Walla, WA 99362, USA.
- 700 1_
- $a Hughes, Daniel F $u Department of Biological Sciences, University of Texas at El Paso, 500 W. University Ave., El Paso, TX 79968, USA.
- 700 1_
- $a Behangana, Mathias $u Department of Environmental Sciences, Makerere University, P.O. Box 7298, Kampala, Uganda.
- 700 1_
- $a Zassi-Boulou, Ange-Ghislain $u Institut National de Recherche en Sciences Exactes et Naturelles, BP 2400 Brazzaville, People's Republic of Congo.
- 700 1_
- $a Greenbaum, Eli $u Department of Biological Sciences, University of Texas at El Paso, 500 W. University Ave., El Paso, TX 79968, USA.
- 773 0_
- $w MED00006574 $t Molecular phylogenetics and evolution $x 1095-9513 $g Roč. 127, č. - (2018), s. 288-303
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/29551523 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y a $z 0
- 990 __
- $a 20190405 $b ABA008
- 991 __
- $a 20190405100329 $b ABA008
- 999 __
- $a ok $b bmc $g 1392081 $s 1051076
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2018 $b 127 $c - $d 288-303 $e 20180315 $i 1095-9513 $m Molecular phylogenetics and evolution $n Mol Phylogenet Evol $x MED00006574
- LZP __
- $a Pubmed-20190405
