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A Recurrent Missense Variant in AP2M1 Impairs Clathrin-Mediated Endocytosis and Causes Developmental and Epileptic Encephalopathy

I. Helbig, T. Lopez-Hernandez, O. Shor, P. Galer, S. Ganesan, M. Pendziwiat, A. Rademacher, CA. Ellis, N. Hümpfer, N. Schwarz, S. Seiffert, J. Peeden, J. Shen, K. Štěrbová, TB. Hammer, RS. Møller, DN. Shinde, S. Tang, L. Smith, A. Poduri, R....

. 2019 ; 104 (6) : 1060-1072. [pub] 20190516

Jazyk angličtina Země Spojené státy americké

Typ dokumentu časopisecké články, Research Support, N.I.H., Extramural, práce podpořená grantem

Perzistentní odkaz   https://www.medvik.cz/link/bmc20006353

Grantová podpora
T32 NS091008 NINDS NIH HHS - United States

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The developmental and epileptic encephalopathies (DEEs) are heterogeneous disorders with a strong genetic contribution, but the underlying genetic etiology remains unknown in a significant proportion of individuals. To explore whether statistical support for genetic etiologies can be generated on the basis of phenotypic features, we analyzed whole-exome sequencing data and phenotypic similarities by using Human Phenotype Ontology (HPO) in 314 individuals with DEEs. We identified a de novo c.508C>T (p.Arg170Trp) variant in AP2M1 in two individuals with a phenotypic similarity that was higher than expected by chance (p = 0.003) and a phenotype related to epilepsy with myoclonic-atonic seizures. We subsequently found the same de novo variant in two individuals with neurodevelopmental disorders and generalized epilepsy in a cohort of 2,310 individuals who underwent diagnostic whole-exome sequencing. AP2M1 encodes the μ-subunit of the adaptor protein complex 2 (AP-2), which is involved in clathrin-mediated endocytosis (CME) and synaptic vesicle recycling. Modeling of protein dynamics indicated that the p.Arg170Trp variant impairs the conformational activation and thermodynamic entropy of the AP-2 complex. Functional complementation of both the μ-subunit carrying the p.Arg170Trp variant in human cells and astrocytes derived from AP-2μ conditional knockout mice revealed a significant impairment of CME of transferrin. In contrast, stability, expression levels, membrane recruitment, and localization were not impaired, suggesting a functional alteration of the AP-2 complex as the underlying disease mechanism. We establish a recurrent pathogenic variant in AP2M1 as a cause of DEEs with distinct phenotypic features, and we implicate dysfunction of the early steps of endocytosis as a disease mechanism in epilepsy.

Danish Epilepsy Centre Filadelfia 4293 Dianalund Denmark

Department of Biomedical and Health Informatics Children's Hospital of Philadelphia Philadelphia PA 19104 USA

Department of Child Neurology Charles University 2nd Faculty of Medicine and University Hospital Motol 150 06 Prague Czech Republic

Department of Neurology and Epileptology Hertie Institute for Clinical Brain Research University of Tübingen 72076 Tübingen Germany

Department of Neurology Harvard Medical School Boston MA 02115 USA

Department of Neurology Rabin Medical Center Petach Tikva 4941492 Israel

Department of Neurology University of Pennsylvania Perelman School of Medicine Philadelphia PA 19104 USA

Department of Neuropediatrics Christian Albrechts University of Kiel 24105 Kiel Germany

Department of Neurosurgery University of Tübingen 72076 Tübingen Germany

Division of Clinical Genomics Ambry Genetics Aliso Viejo CA 92656 USA

Division of Genetics Department of Pediatrics University of California San Francisco Fresno CA 93701 USA

Division of Neurology Children's Hospital of Philadelphia Philadelphia PA 19104 USA

East Tennessee Children's Hospital University of Tennessee Department of Medicine Knoxville TN 37916 USA

Epilepsy Genetics Program Department of Neurology Boston Children's Hospital Boston MA 02115 USA

Freie Universität Berlin Faculty of Biology Chemistry Pharmacy 14195 Berlin Germany

Institute for Regional Health Services University of Southern Denmark 5230 Odense Denmark

Leibniz Forschungsinstitut für Molekulare Pharmakologie 13125 Berlin Germany

Luxembourg Centre for Systems Biomedicine University of Luxembourg 4365 Esch sur Alzette Luxembourg

Sackler School of Medicine Tel Aviv University Tel Aviv 6997801 Israel

Citace poskytuje Crossref.org

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