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Atypical URA5 gene restriction fragment length polymorphism banding profile in Cryptococcus neoformans strains
M. Florek, J. Król, A. Woźniak-Biel,
Jazyk angličtina Země Spojené státy americké
Typ dokumentu časopisecké články
Grantová podpora
1/PB/2016/KNOW
Project supported the by Wroclaw Centre of Biotechnology programme, The Leading National Research Centre (KNOW) for the years 2014-2018.
Odkazy
PubMed
30963417
DOI
10.1007/s12223-019-00699-y
Knihovny.cz E-zdroje
- MeSH
- Cryptococcus neoformans klasifikace genetika MeSH
- genotyp MeSH
- geny hub genetika MeSH
- mikrobiologie životního prostředí MeSH
- mutace MeSH
- mykologické určovací techniky MeSH
- orotátfosforibosyltransferasa genetika MeSH
- polymorfismus délky restrikčních fragmentů MeSH
- sekvence nukleotidů MeSH
- Publikační typ
- časopisecké články MeSH
URA5-RFLP is one of the most widely used genotyping methods relating to Cryptococcus neoformans and C. gattii consensus genotype nomenclature. In order to identify a molecular type, this method uses a visual comparison of digested PCR products of tested and reference strains, therefore any anomaly in RFLP patterns of studied isolates makes recognition difficult or impossible. This report describes a strain of VNIV type showing an atypical URA5-RFLP pattern as well as a group of AD hybrids displaying the same anomaly. The atypical RFLP pattern is the result of a point mutation and emergence of a new restriction site. Emergence of the allele presenting a new banding pattern may lead to misidentification using the URA5-RFLP technique; the results of this study as well as the literature data may suggest the spread of the allele in the environment.
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