• Je něco špatně v tomto záznamu ?

Bifidobacterium canis sp. nov., a novel member of the Bifidobacterium pseudolongum phylogenetic group isolated from faeces of a dog (Canis lupus f. familiaris)

V. Neuzil-Bunesova, GA. Lugli, N. Modrackova, M. Makovska, J. Mrazek, C. Mekadim, S. Musilova, I. Svobodova, R. Spanek, M. Ventura, J. Killer,

. 2020 ; 70 (9) : 5040-5047. [pub] -

Jazyk angličtina Země Velká Británie

Typ dokumentu časopisecké články

Perzistentní odkaz   https://www.medvik.cz/link/bmc20027890

A fructose-6-phosphate phosphoketolase-positive strain (GSD1FST) was isolated from a faecal sample of a 3 weeks old German Shepherd dog. The closest related taxa to isolate GSD1FST based on results from the EZBioCloud database were Bifidobacterium animalis subsp. animalis ATCC 25527T, Bifidobacterium animalis subsp. lactis DSM 10140T and Bifidobacterium anseris LMG 30189T, belonging to the Bifidobacterium pseudolongum phylogenetic group. The resulting 16S rRNA gene identities (compared length of 1454 nucleotides) towards these taxa were 97.30, 97.23 and 97.09 %, respectively. The pairwise similarities of strain GSD1FST using argS, atpA, fusA, hsp60, pyrG, rpsC, thrS and xfp gene fragments to all valid representatives of the B. pseudolongum phylogenetic group were in the concatenated range of 83.08-88.34 %. Phylogenomic analysis based on whole-genome methods such as average nucleotide identity revealed that bifidobacterial strain GSD1FST exhibits close phylogenetic relatedness (88.17 %) to Bifidobacetrium cuniculi LMG 10738T. Genotypic characteristics and phylogenetic analyses based on nine molecular markers, as well as genomic and comparative phenotypic analyses, clearly proved that the evaluated strain should be considered as representing a novel species within the B. pseudolongum phylogenetic group named as Bifidobacterium canis sp. nov. (GSD1FST=DSM 105923T=LMG 30345T=CCM 8806T).

Citace poskytuje Crossref.org

000      
00000naa a2200000 a 4500
001      
bmc20027890
003      
CZ-PrNML
005      
20241126143806.0
007      
ta
008      
210105s2020 xxk f 000 0|eng||
009      
AR
024    7_
$a 10.1099/ijsem.0.004378 $2 doi
035    __
$a (PubMed)32804603
040    __
$a ABA008 $b cze $d ABA008 $e AACR2
041    0_
$a eng
044    __
$a xxk
100    1_
$a Neuzil-Bunesova, Vera $u Department of Microbiology, Nutrition and Dietetics, Czech University of Life Sciences Prague, Kamýcká 129, Prague 6 - Suchdol, 165 00, Czechia.
245    10
$a Bifidobacterium canis sp. nov., a novel member of the Bifidobacterium pseudolongum phylogenetic group isolated from faeces of a dog (Canis lupus f. familiaris) / $c V. Neuzil-Bunesova, GA. Lugli, N. Modrackova, M. Makovska, J. Mrazek, C. Mekadim, S. Musilova, I. Svobodova, R. Spanek, M. Ventura, J. Killer,
520    9_
$a A fructose-6-phosphate phosphoketolase-positive strain (GSD1FST) was isolated from a faecal sample of a 3 weeks old German Shepherd dog. The closest related taxa to isolate GSD1FST based on results from the EZBioCloud database were Bifidobacterium animalis subsp. animalis ATCC 25527T, Bifidobacterium animalis subsp. lactis DSM 10140T and Bifidobacterium anseris LMG 30189T, belonging to the Bifidobacterium pseudolongum phylogenetic group. The resulting 16S rRNA gene identities (compared length of 1454 nucleotides) towards these taxa were 97.30, 97.23 and 97.09 %, respectively. The pairwise similarities of strain GSD1FST using argS, atpA, fusA, hsp60, pyrG, rpsC, thrS and xfp gene fragments to all valid representatives of the B. pseudolongum phylogenetic group were in the concatenated range of 83.08-88.34 %. Phylogenomic analysis based on whole-genome methods such as average nucleotide identity revealed that bifidobacterial strain GSD1FST exhibits close phylogenetic relatedness (88.17 %) to Bifidobacetrium cuniculi LMG 10738T. Genotypic characteristics and phylogenetic analyses based on nine molecular markers, as well as genomic and comparative phenotypic analyses, clearly proved that the evaluated strain should be considered as representing a novel species within the B. pseudolongum phylogenetic group named as Bifidobacterium canis sp. nov. (GSD1FST=DSM 105923T=LMG 30345T=CCM 8806T).
650    _2
$a aldehydlyasy $7 D000446
650    _2
$a zvířata $7 D000818
650    _2
$a techniky typizace bakterií $7 D015373
650    _2
$a zastoupení bazí $7 D001482
650    _2
$a Bifidobacterium $x klasifikace $7 D001644
650    _2
$a DNA bakterií $x genetika $7 D004269
650    _2
$a psi $x mikrobiologie $7 D004285
650    _2
$a feces $x mikrobiologie $7 D005243
650    _2
$a bakteriální geny $7 D005798
650    12
$a fylogeneze $7 D010802
650    _2
$a RNA ribozomální 16S $x genetika $7 D012336
650    _2
$a sekvenční analýza DNA $7 D017422
655    _2
$a časopisecké články $7 D016428
700    1_
$a Lugli, Gabriele Andrea $u Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, Parma, Italy.
700    1_
$a Modrackova, Nikol $u Department of Microbiology, Nutrition and Dietetics, Czech University of Life Sciences Prague, Kamýcká 129, Prague 6 - Suchdol, 165 00, Czechia.
700    1_
$a Makovská, Marie $u Department of Microbiology, Nutrition and Dietetics, Czech University of Life Sciences Prague, Kamýcká 129, Prague 6 - Suchdol, 165 00, Czechia. $7 xx0326024
700    1_
$a Mrazek, Jakub $u Institute of Animal Physiology and Genetics v.v.i., Czech Academy of Sciences, Vídeňská 1083, Prague 4 - Krč, 142 20, Czechia.
700    1_
$a Mekadim, Chahrazed $u Institute of Animal Physiology and Genetics v.v.i., Czech Academy of Sciences, Vídeňská 1083, Prague 4 - Krč, 142 20, Czechia. Department of Microbiology, Nutrition and Dietetics, Czech University of Life Sciences Prague, Kamýcká 129, Prague 6 - Suchdol, 165 00, Czechia.
700    1_
$a Musilova, Sarka $u Department of Microbiology, Nutrition and Dietetics, Czech University of Life Sciences Prague, Kamýcká 129, Prague 6 - Suchdol, 165 00, Czechia.
700    1_
$a Svobodova, Ivona $u Department of Husbandry and Ethology of Animals, Czech University of Life Sciences Prague, Kamýcká 129, Prague 6 - Suchdol, 165 00, Czechia.
700    1_
$a Spanek, Roman $u Institute for Nanomaterials, Advanced Technologies and Innovations, Technical University of Liberec, Bendlova 1407/7, Liberec 1, 461 17, Czechia.
700    1_
$a Ventura, Marco $u Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, Parma, Italy.
700    1_
$a Killer, Jiri $u Institute of Animal Physiology and Genetics v.v.i., Czech Academy of Sciences, Vídeňská 1083, Prague 4 - Krč, 142 20, Czechia. Department of Microbiology, Nutrition and Dietetics, Czech University of Life Sciences Prague, Kamýcká 129, Prague 6 - Suchdol, 165 00, Czechia.
773    0_
$w MED00006002 $t International journal of systematic and evolutionary microbiology $x 1466-5034 $g Roč. 70, č. 9 (2020), s. 5040-5047
856    41
$u https://pubmed.ncbi.nlm.nih.gov/32804603 $y Pubmed
910    __
$a ABA008 $b sig $c sign $y a $z 0
990    __
$a 20210105 $b ABA008
991    __
$a 20241126143803 $b ABA008
999    __
$a ok $b bmc $g 1608225 $s 1119070
BAS    __
$a 3
BAS    __
$a PreBMC
BMC    __
$a 2020 $b 70 $c 9 $d 5040-5047 $e - $i 1466-5034 $m International journal of systematic and evolutionary microbiology $n Int. j. syst. evol. microbiol. (Print) $x MED00006002
LZP    __
$a Pubmed-20210105

Najít záznam

Citační ukazatele

Možnosti archivace