Synteny of orthologous genes conserved in mammals, snake, fly, nematode, and fission yeast
Language English Country United States Media print
Document type Journal Article, Research Support, Non-U.S. Gov't
PubMed
11252172
DOI
10.1007/s003350010259
Knihovny.cz E-resources
- MeSH
- Caenorhabditis elegans MeSH
- Drosophila MeSH
- Genetic Linkage * MeSH
- Snakes MeSH
- DNA, Complementary MeSH
- Conserved Sequence * MeSH
- Humans MeSH
- Membrane Proteins * MeSH
- Molecular Sequence Data MeSH
- Cell Adhesion Molecules genetics MeSH
- Mice, Inbred C57BL MeSH
- Mice MeSH
- Caenorhabditis elegans Proteins * MeSH
- Helminth Proteins genetics MeSH
- Apoptosis Regulatory Proteins MeSH
- Proteins genetics MeSH
- Mammals MeSH
- Schizosaccharomyces MeSH
- Base Sequence MeSH
- Muscle Proteins genetics MeSH
- Animals MeSH
- Check Tag
- Humans MeSH
- Mice MeSH
- Animals MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Names of Substances
- BYSL protein, human MeSH Browser
- Bysl protein, mouse MeSH Browser
- DNA, Complementary MeSH
- Membrane Proteins * MeSH
- Cell Adhesion Molecules MeSH
- PDCD2 protein, human MeSH Browser
- Caenorhabditis elegans Proteins * MeSH
- Helminth Proteins MeSH
- Apoptosis Regulatory Proteins MeSH
- Proteins MeSH
- Muscle Proteins MeSH
- unc-93 protein, C elegans MeSH Browser
Four mouse genes, programmed cell death 2 (Pdcd2 or Rp8), brain protein 44-like (Brp441), bystin-like (Bysl), and uncoordinated-93-like (Unc931) genes were mapped to Chromosome (Chr) 17. The orthologs of these and other mouse Chr 17 genes are localized on Chr III of Caenorhabditis elegans, thus defining a syntenic group conserved between vertebrates and nonvertebrates. In human, mouse, and snake, the PDCD2-, and TATA-binding protein (TBP)-encoding genes are adjacent tail-to-tail. The TBP- and PDCD2-encoding genes are linked also in Drosophila, and, together with proteasomal subunit C5 gene, they are syntenic in human, mouse, C. elegans, and Schizosaccharomyces pombe. The orthologs of tightly linked C. elegans genes, coding for BRP44L and PDCD2, map to about 2-Mb interval on human region 6q27 and on mouse Chr 17. Hitherto, 13 members of synteny conserved between C. elegans and vertebrates have been detected, of which six are located on Drosophila Chr X. Such a distribution of transcription units is nonrandom and could indicate a long-range cis-acting relationship among the genes within the conserved syntenic group.
References provided by Crossref.org
Fine haplotype structure of a chromosome 17 region in the laboratory and wild mouse
Conserved alternative and antisense transcripts at the programmed cell death 2 locus
GENBANK
AA044532, AA499754, AF181116, AI326786, AI596462, AI615282