DicodonUse: the programme for dicodon bias visualization in prokaryotes
Language English Country Czech Republic Media print
Document type Journal Article, Research Support, Non-U.S. Gov't
PubMed
12512801
Knihovny.cz E-resources
- MeSH
- Bacteria genetics MeSH
- Genes, Bacterial MeSH
- Molecular Sequence Data MeSH
- Open Reading Frames MeSH
- Prokaryotic Cells physiology MeSH
- Base Sequence MeSH
- Sequence Analysis, DNA methods MeSH
- Software * MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
The DicodonUse programme is aimed at a fast and simple assessment of genes present in prokaryotic nucleotide sequences. It identifies open reading frames that are not genes, and it distinguishes the genes that inherently belong to the genome in question from the genes that were inserted into the genome in the course of evolution. The programme is based on frequencies of dicodons used by the organism.
Complete genome sequence of the haloaromatic acid-degrading bacterium Achromobacter xylosoxidans A8
