Specific ion effects at protein surfaces: a molecular dynamics study of bovine pancreatic trypsin inhibitor and horseradish peroxidase in selected salt solutions
Language English Country United States Media print
Document type Journal Article, Research Support, Non-U.S. Gov't
PubMed
16571019
DOI
10.1021/jp0567624
Knihovny.cz E-resources
- MeSH
- Amino Acids chemistry MeSH
- Aprotinin chemistry metabolism MeSH
- Sodium Chloride chemistry pharmacology MeSH
- Choline chemistry pharmacology MeSH
- Ions chemistry pharmacology MeSH
- Horseradish Peroxidase chemistry metabolism MeSH
- Models, Molecular MeSH
- Computer Simulation MeSH
- Surface Properties MeSH
- Solutions MeSH
- Sulfates chemistry pharmacology MeSH
- Cattle MeSH
- Salts chemistry pharmacology MeSH
- Protein Structure, Tertiary MeSH
- Binding Sites MeSH
- Animals MeSH
- Check Tag
- Cattle MeSH
- Animals MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Names of Substances
- Amino Acids MeSH
- Aprotinin MeSH
- Sodium Chloride MeSH
- Choline MeSH
- Ions MeSH
- Horseradish Peroxidase MeSH
- Solutions MeSH
- Sulfates MeSH
- sodium sulfate MeSH Browser
- Salts MeSH
The distribution of sodium, choline, sulfate, and chloride ions around two proteins, horseradish peroxidase (HRP) and bovine pancreatic trypsin inhibitor (BPTI), is investigated by means of molecular dynamics simulations with the aim to elucidate ion adsorption at the protein surface. Although the two proteins under investigation are very different from each other, the ion distributions around them are remarkably similar. Sulfate is always strongly attached to the proteins, choline shows a significant, but unspecific, propensity for the protein surfaces, and sodium ions have a weak surface affinity, while chloride has virtually no preference for the protein surface. In mixtures of all four ion species in protein solutions, the resulting distributions are almost a superposition of the distributions of sodium sulfate and choline chloride, except that sodium partially replaces choline close to the proteins. The present simulations support a picture of ions interacting with individual ionic and polar amino acid groups rather than with an averaged protein surface. The results thus show how subtle the so-called Hofmeister and electroselectivity effects are in salt solution of proteins, making all simplified interaction models questionable.
References provided by Crossref.org