Localization of the single copy gene Mdh2 on Xenopus tropicalis chromosomes by FISH-TSA
Language English Country Switzerland Media print
Document type Journal Article, Research Support, Non-U.S. Gov't
PubMed
17268187
DOI
10.1159/000097427
PII: 000097427
Knihovny.cz E-resources
- MeSH
- Genetic Linkage MeSH
- Hybridization, Genetic MeSH
- In Situ Hybridization, Fluorescence * MeSH
- Nucleic Acid Hybridization * MeSH
- Cloning, Molecular MeSH
- DNA, Complementary metabolism MeSH
- Malate Dehydrogenase genetics MeSH
- Chromosome Mapping methods MeSH
- Molecular Sequence Data MeSH
- Xenopus Proteins genetics MeSH
- Amino Acid Sequence MeSH
- Sequence Homology, Amino Acid MeSH
- Xenopus laevis MeSH
- Xenopus genetics MeSH
- Animals MeSH
- Check Tag
- Animals MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Names of Substances
- DNA, Complementary MeSH
- Malate Dehydrogenase MeSH
- Xenopus Proteins MeSH
A single copy gene, mitochondrial malate dehydrogenase 2 (Mdh2), was localized on Xenopus tropicalis chromosomes by fluorescence in situ hybridization coupled with tyramide signal amplification (FISH-TSA). The respective cDNA was cloned and sequenced. The labeled probe hybridized with a subcentromeric region of the long arms of homologous chromosomes 3. Results of comparison of the gene localization with previously mapped X. laevis paralogs strongly suggest a common evolutionary origin of chromosomes 3 and 8 in X. laevis and chromosome 3 in X. tropicalis. This is the first time that a single copy gene has been visualized on X. tropicalis chromosomes. The FISH-TSA method gives a strong signal with a 1-kb labeled probe.
References provided by Crossref.org
Efficient high-throughput sequencing of a laser microdissected chromosome arm