Nucleotide variability of Tahyna virus (Bunyaviridae, Orthobunyavirus) small (S) and medium (M) genomic segments in field strains differing in biological properties
Jazyk angličtina Země Nizozemsko Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
20093153
DOI
10.1016/j.virusres.2010.01.005
PII: S0168-1702(10)00015-8
Knihovny.cz E-zdroje
- MeSH
- 3' nepřekládaná oblast MeSH
- 5' nepřekládaná oblast MeSH
- fylogeneze MeSH
- genetická variace * MeSH
- genom virový MeSH
- kalifornská encefalitida virologie MeSH
- konzervovaná sekvence MeSH
- lidé MeSH
- molekulární sekvence - údaje MeSH
- myši MeSH
- plakové testy MeSH
- proteiny virového obalu genetika MeSH
- RNA virová genetika MeSH
- sekvenční analýza DNA MeSH
- sekvenční homologie MeSH
- shluková analýza MeSH
- virulence MeSH
- viry kalifornské encefalitidy genetika izolace a purifikace patogenita MeSH
- vysoká teplota MeSH
- zvířata MeSH
- Check Tag
- lidé MeSH
- myši MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- 3' nepřekládaná oblast MeSH
- 5' nepřekládaná oblast MeSH
- proteiny virového obalu MeSH
- RNA virová MeSH
Tahyna virus (TAHV), a mosquito-borne bunyavirus (California group), is frequently associated with inapparent or influenza-like (Valtice fever) infections in humans, rarely leading to atypical pneumonia or meningitis. Field TAHV strains exhibit a high variability in their biological properties with respect to virulence for laboratory mouse, temperature-sensitivity or character of plaques in cell culture. In consideration of the variations in the antigenic properties TAHV and its potential genetic variability, we analyzed complete nucleotide sequences of the small (S) and medium (M) genomic segments of field TAHV strains with different combinations of phenotypic markers. S segment was highly conservative in all analyzed TAHV strains. Within the M segment, the highest variability was observed in the G(C) gene encoding viral envelope protein and to a less extent also in the NSm gene. However, 5' and 3' non-coding regions of M segment, as well as in G(N) gene exhibited highly conservative pattern, indicating its functional importance, but minor or no role in the determination of biological properties of TAHV field strains.
Citace poskytuje Crossref.org
GENBANK
GQ386823, GQ386824, GQ386825, GQ386826, GQ386827, GQ386828, GQ386829, GQ386830, GQ386831, GQ386832, GQ386833, GQ386834, GQ386835, GQ386836, GQ386837, GQ386838, GQ386839, GQ386840, GQ386841, GU390669, GU390670, GU390671, GU390672, GU390673, GU390674, GU390675, GU390676, GU390677, GU390678, GU390679, GU390680, GU390681, GU390682, GU390683, GU390684, GU390685, GU390686, GU390687, GU390688
