Microevolution of sympatry: landscape genetics of hedgehogs Erinaceus europaeus and E. roumanicus in Central Europe
Jazyk angličtina Země Velká Británie, Anglie Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
21863052
PubMed Central
PMC3282391
DOI
10.1038/hdy.2011.67
PII: hdy201167
Knihovny.cz E-zdroje
- MeSH
- demografie MeSH
- fylogeografie MeSH
- genetická variace MeSH
- haplotypy MeSH
- ježkovití genetika MeSH
- mikrosatelitní repetice MeSH
- mitochondriální DNA MeSH
- populační genetika * MeSH
- reprodukční izolace MeSH
- sympatrie * MeSH
- tok genů MeSH
- zvířata MeSH
- Check Tag
- mužské pohlaví MeSH
- ženské pohlaví MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Geografické názvy
- Evropa MeSH
- Názvy látek
- mitochondriální DNA MeSH
We used the mitochondrial control region and nuclear microsatellites to assess the distribution patterns, population structure, demography and landscape genetics for the hedgehogs Erinaceus europaeus and Erinaceus roumanicus in a transect of the mid-European zone of sympatry. E. roumanicus was less frequent and restricted to regions with lower altitudes. Demographic analyses suggested recent population growth in this species. A comparison of patterns in the spatial variability of mitochondrial and nuclear DNA indicated less sex-biased dispersal and higher levels of gene flow in E. roumanicus. No evidence of recent hybridisation or introgression was detected. We interpreted these results by comparing with phylogeographic and palaeontological studies as well as with the occurrence of hybridisation in the Russian contact zone. We propose that Central Europe was colonised by E. roumanicus by the beginning of the Neolithic period and that there was a subsequent reinforcement stage as well as the formation of a zone of sympatry after the complete reproductive isolation of both species.
Zobrazit více v PubMed
Anderson EC, Thompson EA. A model-based method for identifying species hybrids using multilocus genetic data. Genetics. 2002;160:1217–1229. PubMed PMC
Aulagnier S, Haffner P, Mitchell-Jones AJ, Moutou F, Zima J. Mammals of Europe, North Africa and the Middle East. A&C Black Publisher Ltd: London; 2009.
Avise JC, Arnold J, Baal RM. Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics. Ann Rev Ecol Syst. 1987;18:489–522.
Bandelt HJ, Foster P, Rohl A. Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol. 1999;16:37–48. PubMed
Becher SA, Griffiths R. Isolation and characterization of six polymorphic microsatellite loci in the European hedgehog Erinaceus europaeus. Mol Ecol. 1997;6:89–90. PubMed
Becher SA, Griffiths R. Genetic differentiation among local populations of the European hedgehog (Erinaceus europaeus) in mosaic habitats. Mol Ecol. 1998;7:1599–1604. PubMed
Belkhir K, Borsa P, Chikhi L, Raufaste N, Bonhomme F. Logiciel sous Windows (tm) pour la Génétique des Populations. Laboratoire Génome, Populations, Interactions: CNRS UMR. 5000. Université de Montpellier II: Montpellier; 2004.
Berggren KT, Ellegren H, Hewitt GM, Seddon JM. Understanding the phylogeographic patterns of European hedgehogs, Erinaceus concolor and E. europaeus using the MHC. Heredity. 2005;95:84–90. PubMed
Bogdanov AS, Bannikova AA, Pirusskii YuM, Formozov NA. Genetic evidence of hybridization between West European and Northern white-breasted Hedgehogs (Erinaceus europaeus and E. roumanicus) in Moscow Region. Biol Bull. 2009;36:647–651. PubMed
Boitani L, Reggiani G. Movements and activity patterns of hedgehogs Erinaceus europeaus in Mediterranean coastal habitats. Zool Anz. 1984;49:193–206.
Corbet GB. The family 539 Erinaceidae: a synthesis of its taxonomy, phylogeny, ecology and zoogeography. Mammal Rev. 1988;18:117–172.
Coyne J, Orr HA. Speciation. Sinauer: Sunderland, MA; 2004.
Doncaster CP. Testing the role of intraguild predation in regulating hedgehog populations. P R Soc London B. 1992;249:113–117. PubMed
Drummond AJ, Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol. 2007;7:214. PubMed PMC
Drummond AJ, Rambaut A, Shapiro B, Pybus OG. Bayesian coalescent inference of past population dynamics from molecular sequences. Mol Biol Evol. 2005;5:1185–1192. PubMed
Excoffier L, Laval G, Schneider S. Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evol Bioinform Online. 2005;1:47–50. PubMed PMC
Falush D, Stephens M, Pritchard JK. Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics. 2003;164:1567–1587. PubMed PMC
Goudet J. FSTAT: A Program to Estimate and Test Gene Diversities and Fixation Indices, Version 2.9.3. Lausanne University: Lausanne, Switzerland; 2001.
Guillot G, Mortier F, Estoup A. GENELAND: a computer package for landscape genetics. Mol Ecol Notes. 2005;5:712–715.
Hall TA. BioEdit: a user—friendly 563 biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser. 1999;41:95–98.
Henderson M, Becher SA, Doncaster CP, Maclean N. Five new polymorphic microsatellite loci in the European hedgehog, Erinaceus europaeus. Mol Ecol. 2000;9:1949–1950. PubMed
Hewitt GM. The genetic legacy of the Quaternary ice ages. Nature. 2000;405:907–913. PubMed
Hewitt GM. Genetic consequences of climatic oscillations in the Quaternary. Philos Trans R Soc Ser B. 2004;359:183–195. PubMed PMC
Holz H. Studien an europäischen Igeln. Z Zool Syst Evol. 1978;16:148–165.
Holz H, Niethammer J.1990aErinaceus europaeus Linnaeus, 1758–Braunbrustigel, WestigelIn: Niethammer J, Krapp F (eds).Handbuch der Säugetiere Europas. Vol. 3/1: Insektenfresser, Herrentiere Aula-Publisher: Wiesbaden; 26–49.
Holz H, Niethammer J.1990bErinaceus roumanicus Martin, 1838—Weißbrustigel, OstigelIn: Niethammer J, Krapp F (eds).Handbuch der Säugetiere Europas. Vol. 3/1: Insektenfresser, Herrentiere Aula-Publisher: Wiesbaden; 50–64.
Hulva P, Fornuskova A, Chudarkova A, Evin A, Allegrini B, Benda P, et al. Mechanisms of radiation in a bat group from the genus Pipistrellus inferred by phylogeography, demography and population genetics. Mol Ecol. 2010;19:5417–5431. PubMed
Kratochvíl J. Zur Kenntnis der Igel der Gattung Erinaceus in der ÈSSR (Insectivora, Mamm.) Zool Listy. 1975;24:297–312.
Manel S, Schwartz MK, Luikart G, Taberlet P. Landscape genetics: combining landscape ecology and population genetics. Trends Ecol Evol. 2003;18:189–197.
Micol T, Doncaster CP, Mackinlay LA. Correlates of local variation in the abundance of hedgehogs Erinaceus europaeus. J Anim Ecol. 1994;63:851–860.
Morris PA. A study of home range and movements in the hedgehog (Erinaceus europaeus) J Zool. 1988;214:433–449.
Poduschka W, Poduschka C. Kreuzungsversuche an mitteleuroäischen. Igeln Säugetierkdl Mitt. 1983;3:1–12.
Posada D, Crandall KA. Modeltest: testing the model of DNA substitution. Bioinformatics. 1998;14:817–818. PubMed
Pritchard JK, Stephens M, Donnely PJ. Inference of population structure using multilocus genotype data. Genetics. 2000;155:945–959. PubMed PMC
Reeve NJ. The home range of the hedgehogs as revealed by a radio tracking study. Sym Zool S. 1982;49:207–230.
Reeve NJ. Hedgehogs. T & AD Poyser (Natural History): London; 1994.
Rondinini C, Doncaster P. Roads as barriers to movement for hedgehogs. Funct Ecol. 2002;16:504–509.
Rousset F. GENEPOP ‘ 007: a complete re-implementation of the GENEPOP software for Windows and Linux. Mol Ecol Resour. 2008;8:103–106. PubMed
Rozas J, Sánchez-DelBarrio JC, Messeguer X, Rozas R. DNASP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics. 2003;19:2496–2497. PubMed
Ruprecht AL. Correlation structure of the skull dimensions in European hedgehogs. Acta Theriol. 1972;17:419–442.
Santucci F, Emerson BC, Hewitt GM. Mitochondrial DNA phylogeography of European hedgehogs. Mol Ecol. 1998;7:1163–1172. PubMed
Seddon JM, Santucci F, Reeve N, Hewitt GM. Caucasus mountains divide postulated postglacial colonization routes in the white-breasted hedgehog, Erinaceus concolor. J Evol Biol. 2002;15:463–467.
Seddon JM, Santucci F, Reeve NJ, Hewitt GM. DNA footprints of European hedgehogs, Erinaceus europaeus and E. concolor: Pleistocene refugia, postglacial expansion and colonization routes. Mol Ecol. 2001;10:2187–2198. PubMed
Selander RK, Hunt WG, Yang SY. Protein polymorphism and genic heterozygosity in two European subspecies of the house mouse. Evolution. 1969;23:379–390. PubMed
Schneider S, Excoffier L. Estimation of past demographic parameters from the distribution of pairwise differences when the mutation rates very among sites: application to human mitochondrial DNA. Genetics. 1999;3:1079–1089. PubMed PMC
Sokolov VY, Aniskin VM, Lukyanova IV. Karyological differentiation of two hedgehog species in genus Erinaceus (Insectivora, Erinaceidae) in the USSR. Zool Zh. 1991;70:111–120.
Sommer RS. When east met west: the sub-fossil footprints of the west European hedgehog and the northen white-breasted hedgehog during the Late Quaternary in Europe. J Zool. 2007;273:82–89.
Storfer A, Murphy MA, Spear SF, Holderegger R, Waits L. Landscape genetics: where are we now. Mol Ecol. 2010;19:3496–3514. PubMed
Suchentrunk F, Haiden A, Hartl GB. On biochemical genetic variability and divergence of the two hedgehog species Erinaceus europaeus and E. concolor in central Europe. Z Saugetierkd. 1998;63:257–265.
Swindell SR, Plasterer TN. SEQMAN: contig assembly. Methods Mol Biol. 1996;70:75–89. PubMed
Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 1994;22:4673–4680. PubMed PMC
Van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P. Micro-checker: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes. 2004;4:535–538.
Wang IJ. Recognizing the temporal distinctions between landscape genetics and phylogeography. Mol Ecol. 2010;19:2605–2608. PubMed
Glacial allopatry vs. postglacial parapatry and peripatry: the case of hedgehogs