Lactobacillus rodentium sp. nov., from the digestive tract of wild rodents
Jazyk angličtina Země Velká Británie, Anglie Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
24478214
DOI
10.1099/ijs.0.054924-0
Knihovny.cz E-zdroje
- MeSH
- bakteriální geny MeSH
- DNA bakterií genetika MeSH
- fermentace MeSH
- fylogeneze * MeSH
- hybridizace nukleových kyselin MeSH
- Lactobacillus klasifikace genetika izolace a purifikace MeSH
- mastné kyseliny chemie MeSH
- molekulární sekvence - údaje MeSH
- myši mikrobiologie MeSH
- peptidoglykan chemie MeSH
- rektum mikrobiologie MeSH
- RNA ribozomální 16S genetika MeSH
- sekvenční analýza DNA MeSH
- techniky typizace bakterií MeSH
- tenké střevo mikrobiologie MeSH
- zastoupení bazí MeSH
- zvířata MeSH
- Check Tag
- myši mikrobiologie MeSH
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Geografické názvy
- Česká republika MeSH
- Názvy látek
- DNA bakterií MeSH
- mastné kyseliny MeSH
- peptidoglykan MeSH
- RNA ribozomální 16S MeSH
Three strains of regular, long, Gram-stain-positive bacterial rods were isolated using TPY, M.R.S. and Rogosa agar under anaerobic conditions from the digestive tract of wild mice (Mus musculus). All 16S rRNA gene sequences of these isolates were most similar to sequences of Lactobacillus gasseri ATCC 33323T and Lactobacillus johnsonii ATCC 33200T (97.3% and 97.2% sequence similarities, respectively). The novel strains shared 99.2-99.6% 16S rRNA gene sequence similarities. Type strains of L. gasseri and L. johnsonii were also most related to the newly isolated strains according to rpoA (83.9-84.0% similarities), pheS (84.6-87.8%), atpA (86.2-87.7%), hsp60 (89.4-90.4%) and tuf (92.7-93.6%) gene sequence similarities. Phylogenetic studies based on 16S rRNA, hsp60, rpoA, atpA and pheS gene sequences, other genotypic and many phenotypic characteristics (results of API 50 CHL, Rapid ID 32A and API ZYM biochemical tests; cellular fatty acid profiles; cellular polar lipid profiles; end products of glucose fermentation) showed that these bacterial strains represent a novel species within the genus Lactobacillus. The name Lactobacillus rodentium sp. nov. is proposed to accommodate this group of new isolates. The type strain is MYMRS/TLU1T (=DSM 24759T=CCM 7945T).
Citace poskytuje Crossref.org
GENBANK
HQ851020, HQ851021, HQ851022, JQ363678, JQ363679, JQ363687, JQ363688, JQ363696, JQ363703, JQ363710, JQ363713, JQ363714, KF841355, KF841356, KF841360, KF841362, KF841367, KF841368
