Stenotrophomonas maltophilia is an omnipresent environmental bacterium emerging as an opportunistic human pathogen and exhibiting multidrug resistance. Here, we report the draft genome sequence of S. maltophilia strain 5BA-I-2, a soil isolate and a member of a phylogenetically basal lineage.

Department of Genetics and Microbiology Faculty of Science Charles University Prague Czech Republic

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Palleroni NJ, Bradbury JF. 1993. Stenotrophomonas, a new bacterial genus for Xanthomonas maltophilia (Hugh 1980) Swings et al. 1983. Int. J. Syst. Bacteriol. 43:606–609 PubMed

Hayward AC, Fegan N, Fegan M, Stirling GR. 2010. Stenotrophomonas and Lysobacter: ubiquitous plant-associated gamma-proteobacteria of developing significance in applied microbiology. J. Appl. Microbiol. 108:756–770. 10.1111/j.1365-2672.2009.04471.x PubMed DOI

Ryan RP, Monchy S, Cardinale M, Taghavi S, Crossman L, Avison MB, Berg G, van der Lelie D, Dow JM. 2009. The versatility and adaptation of bacteria from the genus Stenotrophomonas. Nat. Rev. Microbiol. 7:514–525. 10.1038/nrmicro2163 PubMed DOI

Brooke JS. 2012. Stenotrophomonas maltophilia: an emerging global opportunistic pathogen. Clin. Microbiol. Rev. 25:2–41. 10.1128/CMR.00019-11 PubMed DOI PMC

Denton M, Kerr KG. 1998. Microbiological and clinical aspects of infection associated with Stenotrophomonas maltophilia. Clin. Microbiol. Rev. 11:57–80 PubMed PMC

Nyc O, Matejková J. 2010. Stenotrophomonas maltophilia: Significant contemporary hospital pathogen—review. Folia Microbiol. (Praha) 55:286–294. 10.1007/s12223-010-0043-4 PubMed DOI

Senol E. 2004. Stenotrophomonas maltophilia: the significance and role as a nosocomial pathogen. J. Hosp. Infect. 57:1–7. 10.1016/j.jhin.2004.01.033 PubMed DOI

Berg G, Roskot N, Smalla K. 1999. Genotypic and phenotypic relationships between clinical and environmental isolates of Stenotrophomonas maltophilia. J. Clin. Microbiol. 37:3594–3600 PubMed PMC

Hauben L, Vauterin L, Moore ER, Hoste B, Swings J. 1999. Genomic diversity of the genus Stenotrophomonas. Int. J. Syst. Bacteriol. 49(Pt 4):1749–1760. 10.1099/00207713-49-4-1749 PubMed DOI

Rocco F, De Gregorio E, Colonna B, Di Nocera PP. 2009. Stenotrophomonas maltophilia genomes: a start-up comparison. Int. J. Med. Microbiol. 299:535–546. 10.1016/j.ijmm.2009.05.004 PubMed DOI

Nunvar J, Drevinek P, Licha I. 2012. DNA profiling of Stenotrophomonas maltophilia by PCR targeted to its species-specific repetitive palindromic sequences. Lett. Appl. Microbiol. 54:59–66. 10.1111/j.1472-765X.2011.03172.x PubMed DOI

Margulies M, Egholm M, Altman WE, Attiya S, Bader JS, Bemben LA, Berka J, Braverman MS, Chen YJ, Chen Z, Dewell SB, Du L, Fierro JM, Gomes XV, Godwin BC, He W, Helgesen S, Ho CH, Irzyk GP, Jando SC, Alenquer ML, Jarvie TP, Jirage KB, Kim JB, Knight JR, Lanza JR, Leamon JH, Lefkowitz SM, Lei M, Li J, Lohman KL, Lu H, Makhijani VB, McDade KE, McKenna MP, Myers EW, Nickerson E, Nobile JR, Plant R, Puc BP, Ronan MT, Roth GT, Sarkis GJ, Simons JF, Simpson JW, Srinivasan M, Tartaro KR, Tomasz A, Vogt KA, Volkmer GA, Wang SH, Wang Y, Weiner MP, Yu P, Begley RF, Rothberg JM. 2005. Genome sequencing in microfabricated high-density picolitre reactors. Nature 437:376–380. 10.1038/nature03959 PubMed DOI PMC

Taghavi S, Garafola C, Monchy S, Newman L, Hoffman A, Weyens N, Barac T, Vangronsveld J, van der Lelie D. 2009. Genome survey and characterization of endophytic bacteria exhibiting a beneficial effect on growth and development of poplar trees. Appl. Environ. Microbiol. 75:748–757. 10.1128/AEM.02239-08 PubMed DOI PMC

Nunvar J, Licha I, Schneider B. 2013. Evolution of REP diversity: a comparative study. BMC Genomics 14:385. 10.1186/1471-2164-14-385 PubMed DOI PMC

Kaiser S, Biehler K, Jonas D. 2009. A Stenotrophomonas maltophilia multilocus sequence typing scheme for inferring population structure. J. Bacteriol. 191:2934–2943. 10.1128/JB.00892-08 PubMed DOI PMC

Adamek M, Bathe S. 2011. Stenotrophomonas, p 1063–1071 In Liu D. (ed), Molecular detection of human bacterial pathogens. CRC Press, Boca Raton, FL

Minkwitz A, Berg G. 2001. Comparison of antifungal activities and 16S ribosomal DNA sequences of clinical and environmental isolates of Stenotrophomonas maltophilia. J. Clin. Microbiol. 39:139–145. 10.1128/JCM.39.1.139-145.2001 PubMed DOI PMC

Vasileuskaya-Schulz Z, Kaiser S, Maier T, Kostrzewa M, Jonas D. 2011. Delineation of Stenotrophomonas spp. by multi-locus sequence analysis and MALDI-TOF mass spectrometry. Syst. Appl. Microbiol. 34:35–39. 10.1016/j.syapm.2010.11.011 PubMed DOI