• This record comes from PubMed

DNA barcoding, species-specific PCR and real-time PCR techniques for the identification of six Tribolium pests of stored products

. 2016 Jun 29 ; 6 () : 28494. [epub] 20160629

Language English Country England, Great Britain Media electronic

Document type Journal Article, Research Support, Non-U.S. Gov't

Flour beetles of the genus Tribolium Macleay (Coleoptera: Tenebrionidae) are important stored product pests in China and worldwide. They are often found or are intercepted in grain depots, flour mills, and entry-exit ports, etc. Traditionally, Tribolium species are identified according to the morphological characteristics of the adult. However, it is almost impossible to rapidly identify adult fragments and non-adult stages based on external morphological characteristics. Molecular techniques for the rapid and accurate identification of Tribolium species are required, particularly for pest monitoring and the quarantine of stored products pests. Here, we establish DNA barcoding, species-specific PCR, and real-time PCR techniques for the identification of six stored-product pest Tribolium species including T. castaneum, T. confusum, T. destructor, T. madens, T. freemani and T. brevicornis. We detected the mitochondrial DNA cytochrome oxidase subunit I (COI) barcodes for Tribolium from 18 geographic populations and 101 individuals, built a Tribolium DNA barcode library, and designed species-specific primers and TaqMan probes for the above six Tribolium species. The three techniques were applied to identify Tribolium collected from stored samples and samples captured from quarantine ports. The results demonstrated that three techniques were all able to identify the six species of Tribolium both rapidly and accurately.

See more in PubMed

Nowaczyk K. et al.. Molecular techniques for detection of Tribolium confusum infestations in stored products. J. Econ. Entomol. 102, 1691–1695 (2009). PubMed

Lagisz M., Wilde K. E. & Wolff K. The development of PCR-based markers for molecular sex identification in the model insect species Tribolium castaneum. Entomol. Exp. Appl. 134, 50–59 (2010).

Stejskal V. & Hubert J. Risk of occupational allergy to stored grain arthropods and false pest-risk perception in Czech grain stores. Ann. Agric. Environ. Med. 15, 29–35 (2008). PubMed

Angelini D. R. & Jockusch E. L. Relationships among pest flour beetles of the genus Tribolium (Tenebrionidae) inferred from multiple molecular markers. Mol. Phylogenet. Evol. 46, 127–141 (2008). PubMed PMC

Nakakita H. Rediscovery of Tribolium freemani Hinton: a stored product insect unexpected to entomologists for past 100 years. Jpn. Ag. Res. Q. 16, 239–245 (1983).

He P. H., Zhang T. et al.. Species of stored grain insects and mites trapped by corrugated board method on the surface of grain bulk in granary. J. Henan University of Technology. 36, 50–54 (2015).

Hagstrum D. & Subramanyam B. Stored-product Insect Resource. AACC Press. St. Paul. p. 509 (2009).

Stejskal V., Hubert J., Aulickyv R. & Kucerova Z. Over-view of present and past and pest-associated risks in stored food and feed products: European perspective. J. Stored. Prod. Res. 64, 122–132 (2015).

Hinton H. E. A synopsis of the genus Tribolium Magley, with some remarks on the evolution of its species-group (Coleoptera, Tenebrionidae). Bull. Entomol. Res. 39, 13–55 (1948). PubMed

Huang C. G., Hsu J. C., Haymer D. S., Lin G. C. & Wu W. J. Rapid identification of the Mediterranean fruit fly (Diptera: Tephritidae) by loop-mediated isothermal amplification. J. Econ. Entomol. 102, 1239–1246 (2009). PubMed PMC

Wang Y. J. et al.. DNA barcoding of five common stored product pest species of genus Cryptolestes (Coleoptera: Laemophloeidae). Bull. Entomol. Res. 104, 671–678 (2014). PubMed

Varadínová Z., Wang Y. J. & Li Z. H. COI barcode based species-specific primers for identification of five species of stored-product pests from genus Cryptolestes (Coleoptera: Laemophloeidae). Bull. Entomol. Res. 105, 202–209 (2015). PubMed

Zhang C. W., Xu L. P., Lu M., Liang X. & Li J. Rapid molecular identification of Tribolium destructor. Agric. Biotechnol. 4, 49–52 (2014).

Zhang H. S., Feng Z. J. & Cheng C. Molecular identification of T. castaneum and T. confusum based on PCR-RFLP analyses of 28S rRNA gene. Environ. Entomol. 36, 171–175 (2014). PubMed

Folmer O., Black M., Hoeh W., Lutz R. & Vrijenhoek R. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol. Mar. Biol. Biotechnol. 3, 294–299 (1994). PubMed

Librado P. & Rozas J. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25, 1451–1452 (2009). PubMed

Tamura K. et al.. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28, 2731–2739 (2011). PubMed PMC

Puillandre N., Lambert A., Brouillet S. & Achaz G. ABGD, automated barcode gap discovery for primary species delimitation. Mol. Ecol. 21, 1864–1877 (2012). PubMed

Meiklejohn K. A., Wallman J. F. & Dowton M. DNA-based identification of forensically important Australian Sarcophagidae (Diptera). Int. J. Legal Med. 125, 27–32 (2011). PubMed

Hebert P. D. N., Penton E. H., Burns J. M., Janzen D. H. & Hallwachs W. Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator. Proc. Natl. Acad. Sci. USA. 101, 14812–14817 (2004). PubMed PMC

Find record

Citation metrics

Loading data ...

Archiving options

Loading data ...