Crystal structure of human interferon-γ receptor 2 reveals the structural basis for receptor specificity
Jazyk angličtina Země Spojené státy americké Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
27599734
PubMed Central
PMC5013595
DOI
10.1107/s2059798316012237
PII: S2059798316012237
Knihovny.cz E-zdroje
- Klíčová slova
- class 2 cytokine receptors, fibronectin type III domain, interferon-γ receptor 2,
- MeSH
- aminokyselinové motivy MeSH
- disulfidy chemie MeSH
- glykosylace MeSH
- konformace proteinů MeSH
- krystalografie rentgenová MeSH
- lidé MeSH
- molekulární modely MeSH
- proteinové domény MeSH
- receptory interferonů chemie MeSH
- sbalování proteinů MeSH
- stabilita proteinů MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- disulfidy MeSH
- IFNGR2 protein, human MeSH Prohlížeč
- receptory interferonů MeSH
Interferon-γ receptor 2 is a cell-surface receptor that is required for interferon-γ signalling and therefore plays a critical immunoregulatory role in innate and adaptive immunity against viral and also bacterial and protozoal infections. A crystal structure of the extracellular part of human interferon-γ receptor 2 (IFNγR2) was solved by molecular replacement at 1.8 Å resolution. Similar to other class 2 receptors, IFNγR2 has two fibronectin type III domains. The characteristic structural features of IFNγR2 are concentrated in its N-terminal domain: an extensive π-cation motif of stacked residues KWRWRH, a NAG-W-NAG sandwich (where NAG stands for N-acetyl-D-glucosamine) and finally a helix formed by residues 78-85, which is unique among class 2 receptors. Mass spectrometry and mutational analyses showed the importance of N-linked glycosylation to the stability of the protein and confirmed the presence of two disulfide bonds. Structure-based bioinformatic analysis revealed independent evolutionary behaviour of both receptor domains and, together with multiple sequence alignment, identified putative binding sites for interferon-γ and receptor 1, the ligands of IFNγR2.
Zobrazit více v PubMed
Bach, E. A., Szabo, S. J., Dighe, A. S., Ashkenazi, A., Aguet, M., Murphy, K. M. & Schreiber, R. D. (1995). PubMed
Bazan, J. F. (1990).
Bleicher, L., de Moura, P. R., Watanabe, L., Colau, D., Dumoutier, L., Renauld, J.-C. & Polikarpov, I. (2008). PubMed
Böhm, G., Muhr, R. & Jaenicke, R. (1992). PubMed
Bravo, J., Staunton, D., Heath, J. K. & Jones, E. Y. (1998). PubMed PMC
Camacho, C., Coulouris, G., Avagyan, V., Ma, N., Papadopoulos, J., Bealer, K. & Madden, T. L. (2009). PubMed PMC
Cancino-Díaz, J. C., Reyes-Maldonado, E., Bañuelos-Pánuco, C. A., Jiménez-Zamudio, L., García-Latorre, E., León-Dorantes, G., Blancas-González, F., Paredes-Cabrera, G. & Cancino-Díaz, M. E. (2002). PubMed
Černý, J., Biedermannová, L., Mikulecký, P., Zahradnik, J., Charnavets, T., Šebo, P. & Schneider, B. (2015). PubMed PMC
Černý, J., Jurečka, P., Hobza, P. & Valdés, H. (2007). PubMed
Chen, V. B., Arendall, W. B., Headd, J. J., Keedy, D. A., Immormino, R. M., Kapral, G. J., Murray, L. W., Richardson, J. S. & Richardson, D. C. (2010). PubMed PMC
Cook, J. R., Emanuel, S. L., Donnelly, R. J., Soh, J., Mariano, T. M., Schwartz, B., Rhee, S. & Pestka, S. (1994). PubMed
Emsley, P. & Cowtan, K. (2004). PubMed
Fountoulakis, M., Juranville, J.-F., Stüber, D., Weibel, E. K. & Garotta, G. (1990). PubMed
Furche, F., Ahlrichs, R., Hättig, C., Klopper, W., Sierka, M. & Weigend, F. (2014).
Glaser, F., Pupko, T., Paz, I., Bell, R. E., Bechor-Shental, D., Martz, E. & Ben-Tal, N. (2003). PubMed
Harlos, K., Martin, D. M., O’Brien, D. P., Jones, E. Y., Stuart, D. I., Polikarpov, I., Miller, A., Tuddenham, E. G. & Boys, C. W. (1994). PubMed
Hemmi, S., Böhni, R., Stark, G., Di Marco, F. & Aguet, M. (1994). PubMed
Hoffmann, H. H., Schneider, W. M. & Rice, C. M. (2015). PubMed PMC
Humphrey, W., Dalke, A. & Schulten, K. (1996). PubMed
Josephson, K., Logsdon, N. J. & Walter, M. R. (2001). PubMed
Jung, V., Rashidbaigi, A., Jones, C., Tischfield, J. A., Shows, T. B. & Pestka, S. (1987). PubMed PMC
Kotenko, S. V., Izotova, L. S., Pollack, B. P., Mariano, T. M., Donnelly, R. J., Muthukumaran, G., Cook, J. R., Garotta, G., Silvennoinen, O., Ihle, J. N. & Pestka, S. (1995). PubMed
Krause, C. D., Lavnikova, N., Xie, J., Mei, E., Mirochnitchenko, O. V., Jia, Y., Hochstrasser, R. M. & Pestka, S. (2006). PubMed
Landar, A., Curry, B., Parker, M. H., DiGiacomo, R., Indelicato, S. R., Nagabhushan, T. L., Rizzi, G. & Walter, M. R. (2000). PubMed
Langer, G., Cohen, S. X., Lamzin, V. S. & Perrakis, A. (2008). PubMed PMC
Langer, J. A., Cutrone, E. C. & Kotenko, S. (2004). PubMed
Larsen, K. S., Østergaard, H., Bjelke, J. R., Olsen, O. H., Rasmussen, H. B., Christensen, L., Kragelund, B. B. & Stennicke, H. R. (2007). PubMed PMC
Lin, F.-C. & Young, H. A. (2013).
Logsdon, N. J., Deshpande, A., Harris, B. D., Rajashankar, K. R. & Walter, M. R. (2012). PubMed PMC
Long, F., Vagin, A. A., Young, P. & Murshudov, G. N. (2008). PubMed PMC
Marsters, S. A., Pennica, D., Bach, E., Schreiber, R. D. & Ashkenazi, A. (1995). PubMed PMC
McElroy, C. A., Dohm, J. A. & Walsh, S. T. R. (2009). PubMed PMC
Miknis, Z., Margracheva, E., Li, W., Zdanov, A., Kotenko, S. W. & Wlodawer, A. (2010). PubMed PMC
Mikulecký, P., Černý, J., Biedermannová, L., Petroková, H., Kuchař, M., Vondrášek, J., Malý, P., Šebo, P. & Schneider, B. (2013). PubMed PMC
Moura, P. R. de, Watanabe, L., Bleicher, L., Colau, D., Dumoutier, L., Lemaire, M. M., Renauld, J.-C. & Polikarpov, I. (2009). PubMed
Murshudov, G. N., Skubák, P., Lebedev, A. A., Pannu, N. S., Steiner, R. A., Nicholls, R. A., Winn, M. D., Long, F. & Vagin, A. A. (2011). PubMed PMC
O’Boyle, N. M., Banck, M., James, C. A., Morley, C., Vandermeersch, T. & Hutchison, G. R. (2011). PubMed PMC
Okonechnikov, K., Golosova, O. & Fursov, M. (2012). PubMed
Pestka, S., Kotenko, S. V., Muthukumaran, G., Izotova, L. S., Cook, J. R. & Garotta, G. (1997). PubMed
Pettersen, E. F., Goddard, T. D., Huang, C. C., Couch, G. S., Greenblatt, D. M., Meng, E. C. & Ferrin, T. E. (2004). PubMed
Plíhal, O., Sklenář, J., Kmoníčková, J., Man, P., Pompach, P., Havlíček, V., Křen, V. & Bezouška, K. (2004). PubMed
Pompach, P., Man, P., Kavan, D., Hofbauerová, K., Kumar, V., Bezouška, K., Havlíček, V. & Novák, P. (2009). PubMed
Ring, A. M., Lin, J.-X., Feng, D., Mitra, S., Rickert, M., Bowman, G. R., Pande, V. S., Li, P., Moraga, I., Spolski, R., Özkan, E., Leonard, W. J. & Garcia, K. C. (2012). PubMed PMC
Rüger, R., van Lenthe, E., Lu, Y., Frenzel, J., Heine, T. & Visscher, L. (2015). PubMed
Savan, R., Ravichandran, S., Collins, J. R., Sakai, M. & Young, H. A. (2009). PubMed PMC
Schilling, B., Row, R. H., Gibson, B. W., Guo, X. & Young, M. M. (2003). PubMed
Schoenborn, J. R. & Wilson, C. B. (2007). PubMed
Sievers, F., Wilm, A., Dineen, D., Gibson, T. J., Karplus, K., Li, W., Lopez, R., McWilliam, H., Remmert, M., Söding, J., Thompson, J. D. & Higgins, D. G. (2011). PubMed PMC
Thiel, D. J., le Du, M.-H., Walter, R. L., D’Arcy, A., Chène, C., Fountoulakis, M., Garotta, G., Winkler, F. K. & Ealick, S. E. (2000). PubMed
Thomas, C., Moraga, I., Levin, D., Krutzik, P. O., Podoplelova, Y., Trejo, A., Lee, C., Yarden, G., Vleck, S. E., Glenn, J. S., Nolan, G. P., Piehler, J., Schreiber, G. & Garcia, K. C. (2011). PubMed PMC
Walter, M. R., Windsor, W. T., Nagabhushan, T. L., Lundell, D. J., Lunn, C. A., Zauodny, P. J. & Narula, S. K. (1995). PubMed
Yoon, S.-I., Jones, B. C., Logsdon, N. J., Harris, B. D., Deshpande, A., Radaeva, S., Halloran, B. A., Gao, B. & Walter, M. R. (2010). PubMed PMC