Crystal structure of native β-N-acetylhexosaminidase isolated from Aspergillus oryzae sheds light onto its substrate specificity, high stability, and regulation by propeptide
Jazyk angličtina Země Anglie, Velká Británie Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
29239122
DOI
10.1111/febs.14360
Knihovny.cz E-zdroje
- Klíčová slova
- X-ray crystallography, active pocket, carbohydrate biotechnology, glycosylation, mass spectrometry, propeptide,
- MeSH
- Aspergillus oryzae enzymologie MeSH
- beta-N-acetylhexosaminidasy chemie metabolismus MeSH
- dimerizace MeSH
- fungální proteiny chemie metabolismus MeSH
- G(M2) aktivátorový protein chemie metabolismus MeSH
- G(M2) gangliosid chemie metabolismus MeSH
- glykosylace MeSH
- interakční proteinové domény a motivy MeSH
- katalytická doména MeSH
- konzervovaná sekvence MeSH
- krystalografie rentgenová MeSH
- ligandy MeSH
- molekulární modely * MeSH
- posttranslační úpravy proteinů MeSH
- prekurzory enzymů chemie metabolismus MeSH
- sekvence aminokyselin MeSH
- sekvenční seřazení MeSH
- stabilita proteinů MeSH
- strukturní homologie proteinů MeSH
- substrátová specifita MeSH
- vazebná místa MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- beta-N-acetylhexosaminidasy MeSH
- fungální proteiny MeSH
- G(M2) aktivátorový protein MeSH
- G(M2) gangliosid MeSH
- ligandy MeSH
- prekurzory enzymů MeSH
UNLABELLED: β-N-acetylhexosaminidase from the fungus Aspergillus oryzae is a secreted extracellular enzyme that cleaves chitobiose into constituent monosaccharides. It belongs to the GH 20 glycoside hydrolase family and consists of two N-glycosylated catalytic cores noncovalently associated with two 10-kDa O-glycosylated propeptides. We used X-ray diffraction and mass spectrometry to determine the structure of A. oryzae β-N-acetylhexosaminidase isolated from its natural source. The three-dimensional structure determined and refined to a resolution of 2.3 Å revealed that this enzyme is active as a uniquely tight dimeric assembly further stabilized by N- and O-glycosylation. The propeptide from one subunit forms extensive noncovalent interactions with the catalytic core of the second subunit in the dimer, and this chain swap suggests the distinctive structural mechanism of the enzyme's activation. Unique structural features of β-N-acetylhexosaminidase from A. oryzae define a very stable and robust framework suitable for biotechnological applications. The crystal structure reported here provides structural insights into the enzyme architecture as well as the detailed configuration of the active site. These insights can be applied to rational enzyme engineering. DATABASE: Structural data are available in the PDB database under the accession number 5OAR. ENZYME: β-N-acetylhexosaminidase (EC 3.2.1.52).
Department of Biochemistry Faculty of Science Charles University Prague Czech Republic
Institute of Microbiology The Czech Academy of Sciences Prague Czech Republic
Institute of Molecular Genetics The Czech Academy of Sciences Prague Czech Republic
Institute of Organic Chemistry and Biochemistry The Czech Academy of Sciences Prague Czech Republic
Institute of Physics Faculty of Mathematics and Physics Charles University Prague Czech Republic
Citace poskytuje Crossref.org
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