First genotype-phenotype study reveals HLA-DQβ1 insertion heterogeneity in high-resolution manometry achalasia subtypes
Jazyk angličtina Země Anglie, Velká Británie Médium print-electronic
Typ dokumentu časopisecké články, multicentrická studie
PubMed
30788115
PubMed Central
PMC6374847
DOI
10.1177/2050640618804717
PII: 10.1177_2050640618804717
Knihovny.cz E-zdroje
- Klíčová slova
- Achalasia, HLA-DQβ1, genetic risk variant, high-resolution manometry,
- MeSH
- achalázie jícnu diagnóza epidemiologie etiologie MeSH
- alely MeSH
- fenotyp * MeSH
- genetická heterogenita * MeSH
- genotyp * MeSH
- HLA-DQ beta řetězec genetika imunologie MeSH
- jednonukleotidový polymorfismus MeSH
- lékařská geografie MeSH
- lidé MeSH
- manometrie * MeSH
- prevalence MeSH
- průřezové studie MeSH
- surveillance populace MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- multicentrická studie MeSH
- Geografické názvy
- Česká republika MeSH
- Německo MeSH
- Řecko MeSH
- Názvy látek
- HLA-DQ beta řetězec MeSH
- HLA-DQB1 antigen MeSH Prohlížeč
BACKGROUND: Achalasia is a primary oesophageal motility disorder. Although aetiology remains mainly unknown, a genetic risk variant, rs28688207 in HLA-DQB1, showed strong achalasia association suggesting involvement of immune-mediated processes in the pathogenesis. High-resolution manometry recognises three types of achalasia. The aim of our study was to perform the first genotype-phenotype analysis investigating the frequency of rs28688207 across the high-resolution manometry subtypes. METHODS: This was a cross-sectional retrospective study. Achalasia patients from tertiary centres in the Czech Republic (n = 163), Germany (n = 114), Greece (n = 70) and controls were enrolled. All subjects were genotyped for the rs28688207 insertion. The Kruskal-Wallis test was used for the genotype-phenotype analysis. RESULTS: A total of 347 achalasia patients (type I - 89, II - 210, III - 48) were included. The overall frequency of the rs28688207 was 10.3%. The distribution of the insertion was significantly different across the high-resolution manometry subtypes (p = 0.038), being most prevalent in type I (14.6%), followed by type II (9.5%) and III (6.3%). CONCLUSION: The frequency of the HLA-DQB1 insertion differs among high-resolution manometry achalasia subtypes. The insertion is most prevalent in type I, suggesting that immune-mediated mechanisms triggered by the insertion may play a more prominent role in the pathogenesis of this subtype.
Department of Genomics University of Bonn Bonn Germany
Faculty of Medicine Ostrava University Ostrava Czech Republic
Foregut Surgery Department Hippokration General Hospital of Athens Athens Greece
Institute for Medical Biometry Informatics and Epidemiology University of Bonn Bonn Germany
Institute of Human Genetics University of Bonn Bonn Germany
Institute of Physiology Charles University Prague Prague Czech Republic
William Harvey Research Institute University of London London UK
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