Four new Ophiostoma species associated with conifer- and hardwood-infesting bark and ambrosia beetles from the Czech Republic and Poland

. 2019 Oct ; 112 (10) : 1501-1521. [epub] 20190528

Jazyk angličtina Země Nizozemsko Médium print-electronic

Typ dokumentu časopisecké články

Perzistentní odkaz   https://www.medvik.cz/link/pmid31140027

Grantová podpora
UMO-2014/15/NZ9/00560) Narodowe Centrum Nauki (PL)

Odkazy

PubMed 31140027
PubMed Central PMC6748885
DOI 10.1007/s10482-019-01277-5
PII: 10.1007/s10482-019-01277-5
Knihovny.cz E-zdroje

Fungi under the order Ophiostomatales (Ascomycota) are known to associate with various species of bark beetles (Coleoptera: Curculionidae: Scolytinae). In addition this group of fungi contains many taxa that can impart blue-stain on sapwood and some are important tree pathogens. A recent survey that focussed on the diversity of the Ophiostomatales in the forest ecosystems of the Czech Republic and Poland uncovered four putative new species. Phylogenetic analyses of four gene regions (ITS1-5.8S-ITS2 region, ß-tubulin, calmodulin, and translation elongation factor 1-α) indicated that these four species are members of the genus Ophiostoma. All four newly described species can be distinguished from each other and from closely related species based on DNA sequence comparisons, morphological characters, growth rates, and their insect associations. Based on this study four new taxa can be circumscribed and the following names are provided: Ophiostoma pityokteinis sp. nov., Ophiostoma rufum sp. nov., Ophiostoma solheimii sp. nov., and Ophiostoma taphrorychi sp. nov. O. rufum sp. nov. is a member of the Ophiostoma piceae species complex, while O. pityokteinis sp. nov. resides in a discrete lineage within Ophiostoma s. stricto. O. taphrorychi sp. nov. together with O. distortum formed a well-supported clade in Ophiostoma s. stricto close to O. pityokteinis sp. nov. O. solheimii sp. nov. groups within a currently undefined lineage A, which also includes Ophiostoma grandicarpum and Ophiostoma microsporum. This study highlights the need for more intensive surveys that should include additional countries of Central Europe, insect vectors and host tree species in order to elucidate Ophiostoma species diversity in this region.

Zobrazit více v PubMed

Aas T, Solheim H, Jankowiak R, Bilański P, Hausner G. Four new Ophiostoma species associated with hardwood-infesting bark beetles in Norway and Poland. Fungal Biol. 2018;122:1142–1158. doi: 10.1016/j.funbio.2018.08.001. PubMed DOI

Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol. 1990;215:403–410. doi: 10.1016/S0022-2836(05)80360-2. PubMed DOI

Butin H, Zimmermann G. Zwei neue holzverfärbende Ceratocystis-Arten in Buchenholz (Fagus sylvatica L.) J Phytopathol. 1972;74:281–287. doi: 10.1111/j.1439-0434.1972.tb02583.x. DOI

Carbone I, Kohn LM. A method for designing primer sets for speciation studies filamentous ascomycetes. Mycologia. 1999;91:553–556. doi: 10.1080/00275514.1999.12061051. DOI

Carlier FX, Decock C, Jacobs K, Maraite H. Ophiostoma arduennense sp. nov. (Ophiostomatales, Ascomycota) from Fagus sylvatica in southern Belgium. Mycol Res. 2006;110:801–810. doi: 10.1016/j.mycres.2006.03.010. PubMed DOI

Chang R, Duong TA, Taerum SJ, Wingfield MJ, Zhou XD, Yin M, De Beer ZW. Ophiostomatoid fungi associated with the spruce bark beetle Ips typographus, including 11 new species from China. Persoonia. 2019;42:50–74. doi: 10.3767/persoonia.2019.42.03. PubMed DOI PMC

Chung W-H, Kim J-J, Yamaoka J, Uzunovic A, Masuya A, Breuil C. Ophiostoma breviusculum sp. nov. (Ophiostomatales, Ascomycota) is a new species in the Ophiostoma piceae complex associated with bark beetles infesting larch in Japan. Mycologia. 2006;98:801–814. doi: 10.1080/15572536.2006.11832651. PubMed DOI

Darriba D, Taboada GL, Doallo R, Posada D. jModelTest 2: more models, new heuristics and parallel computing. Nat Methods. 2012;9:772. doi: 10.1038/nmeth.2109. PubMed DOI PMC

Davidson RW. Some additional species of Ceratostomella in the United States. Mycologia. 1942;34:650–662. doi: 10.1080/00275514.1942.12020934. DOI

Davidson RW. New species of Ceratocystis. Mycologia. 1971;63:5–15. doi: 10.1080/00275514.1971.12019076. DOI

De Beer ZW, Wingfield MJ. Emerging lineages in the Ophiostomatales. In: Seifert KA, De Beer ZW, Wingfield MJ, editors. The ophiostomatoid fungi: expanding frontiers, CBS biodiversity series 12. Utrecht: CBS Press; 2013. pp. 21–46.

De Beer ZW, Duong TA, Wingfield MJ. The divorce of Sporothrix and Ophiostoma: solution to a problematic relationship. Stud Mycol. 2016;83:165–191. doi: 10.1016/j.simyco.2016.07.001. PubMed DOI PMC

Duong TA, De Beer ZW, Wingfield BD, Wingfield MJ. Phylogeny and taxonomy of species in the Grosmannia serpens complex. Mycologia. 2012;104:715–732. doi: 10.3852/11-109. PubMed DOI

Gardes M, Bruns TD. ITS primers with enhanced specificity for Basidiomycetes—application to the identification of mycorrhiza and rusts. Mol Ecol. 1993;2:113–118. doi: 10.1111/j.1365-294X.1993.tb00005.x. PubMed DOI

Glass NL, Donaldson GC. Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. App Environ Microb. 1995;61:1323–1330. PubMed PMC

Grobbelaar J, De Beer ZW, Bloomer P, Wingfield MJ, Wingfield BD. Ophiostoma tsotsi sp. nov., a wound- infesting fungus of hardwood trees in Africa. Mycopathologia. 2010;169:413–423. doi: 10.1007/s11046-009-9267-8. PubMed DOI

Guindon S, Gascuel O. A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood. Syst Biol. 2003;52:696–704. doi: 10.1080/10635150390235520. PubMed DOI

Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, Gascuel O. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol. 2010;59:307–321. doi: 10.1093/sysbio/syq010. PubMed DOI

Hall TA. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser. 1999;41:95–98.

Harrington T. Diseases of conifers caused by species of Ophiostoma and Leptographium. In: Wingfield MJ, Seifert KA, Webber JF, editors. Ceratocystis and Ophiostoma: taxonomy, ecology and pathogenicity. St. Paul: American Phytopathological Society Press; 1993. pp. 161–172.

Harrington TC, McNew D, Steimel J, Hofstra D, Farrel R. Phylogeny and taxonomy of the Ophiostoma piceae complex and the Dutch elm disease fungi. Mycologia. 2001;93:111–136. doi: 10.1080/00275514.2001.12061284. DOI

Jankowiak R. Fungi associated with Ips typographus on Picea abies in Southern Poland and their succession into the phloem and sapwood of beetle-infested trees and logs. Forest Pathol. 2005;35:37–55. doi: 10.1111/j.1439-0329.2004.00395.x. DOI

Jankowiak R. Fungi associated with Tomicus piniperda in Poland and assessment of their virulence using Scots pine seedlings. Ann For Sci. 2006;63:801–808. doi: 10.1051/forest:2006063. DOI

Jankowiak R. Fungi associated with Tomicus minor on Pinus sylvetris in Poland and their succession into the sapwood of beetle-infested windblown trees. Can J For Res. 2008;38:2579–2588. doi: 10.1139/X08-101. DOI

Jankowiak R, Bilański P. Ophiostomatoid fungi associated with root-feeding bark beetles in Poland. Forest Pathol. 2013;43:422–428.

Jankowiak R, Strzałka B, Bilański P, Kacprzyk M, Lukášová K, Linnakoski R, Misztela M, Rossa R. Diversity of Ophiostomatales species associated with conifer-infesting beetles in the Western Carpathians. Eur J For Res. 2017;136:939–956. doi: 10.1007/s10342-017-1081-0. DOI

Jankowiak R, Strzałka B, Bilański P, Linnakoski R, Aas T, Solheim H, Groszek M, de Beer ZW. Two new Leptographium spp. reveal an emerging complex of hardwood-infecting species in the Ophiostomatales. A van Leeuw J Microb. 2017;110:1537–1553. doi: 10.1007/s10482-017-0905-8. PubMed DOI

Jankowiak R, Ostafińska A, Aas T, Bilański P, Linnakoski R, Hausner G. Three new Leptographium spp. (Ophiostomatales) infecting hardwood trees in Norway and Poland. A van Leeuw J Microb. 2018;111:2323–2347. doi: 10.1007/s10482-018-1123-8. PubMed DOI PMC

Jankowiak R, Strzałka B, Bilański P, Kacprzyk M, Wieczorek P. Ophiostomatoid fungi associated with hardwood-infesting bark and ambrosia beetles in Poland: taxonomic diversity and vector specificity. Fungal Ecol. 2019;39:152–167. doi: 10.1016/j.funeco.2019.02.001. DOI

Kamgan Nkuekam G, De Beer ZW, Wingfield MJ, Roux J. A diverse assemblage of Ophiostoma species, including two new taxa on eucalypt trees in South Africa. Mycol Prog. 2011;11:515–533. doi: 10.1007/s11557-011-0767-9. DOI

Katoh K, Standley DM. MAFFT multiple sequence alignment software version 7, improvements in performance and usability. Mol Biol Evol. 2013;30:772–780. doi: 10.1093/molbev/mst010. PubMed DOI PMC

Kehr RD, Wulf A. Fungi associated with above-ground portions of declining oaks (Quercus robur) in Germany. Eur J For Pathol. 1993;23:18–27. doi: 10.1111/j.1439-0329.1993.tb00803.x. DOI

Kirisits T (2001) Studies on the association of ophiostomatoid fungi with bark beetles in Austria with special emphasis on Ips typographus and Ips cembrae and their associated fungi Ceratocystis polonica and Ceratocystis laricicola. Dissertation, Universität für Bodenkultur (BOKU) Wien

Kirschner R. Diversity of filamentous fungi in bark beetle galleries in central Europe. In: Misra JK, Horn BW, editors. Trichomycetes and other fungal groups. Enfield, Plymouth: Science Publishers, Inc.; 2001. pp. 175–196.

Kornerup A, Wanscher JH. Methuen handbook of colour. 3. London: Eyre Methuen; 1978.

Kotýnková-Sychrová E. Mykoflóra chodeb kůrovců v Československu. Česká Mycol. 1966;20:45–53.

Kowalski T. Oak decline: I. Fungi associated with various disease symptoms on overground portions of Middle-aged and old oak (Quercus robur L.) Eur J Forest Pathol. 1991;21:136–151. doi: 10.1111/j.1439-0329.1991.tb01418.x. DOI

Kowalski T, Butin H. Taxonomie bekannter und neuer Ceratocystis-Arten an Eiche (Quercus robur L.) Phytophathol Z. 1989;124:236–248. doi: 10.1111/j.1439-0434.1989.tb04919.x. DOI

Linnakoski R, De Beer ZW, Ahtiainen J, Sidorov E, Niemelä P, Pappinen A, Wingfield MJ. Ophiostoma spp. associated with pine- and spruce-infesting bark beetles in Finland and Russia. Persoonia. 2010;25:72–93. doi: 10.3767/003158510X550845. PubMed DOI PMC

Linnakoski R, Jankowiak R, Villari C, Kirisits T, Solheim H, De Beer ZW, Wingfield MJ. The Ophiostoma clavatum species complex: a newly defined group in the Ophiostomatales including three novel taxa. Antonie van Leeuwenhoek J Microb. 2016;109:987–1018. doi: 10.1007/s10482-016-0700-y. PubMed DOI

Loo JA. Ecological impacts of non-indigenous invasive fungi as forest pathogens. Biol Invasions. 2009;11:81–96. doi: 10.1007/s10530-008-9321-3. DOI

Malloch D, Blackwell M. Dispersal biology of the ophiostomatoid fungi. In: Wingfield MJ, Seifert KA, Webber JF, editors. Ceratocystis and Ophiostoma: taxonomy, ecology, and pathogenicity. St Paul: American Phytopathological Society Press; 1993. pp. 195–206.

Novotný D, Šrůtka P. Ophiostoma stenoceras and O. grandicarpum (Ophiostomatales) first records in the Czech Republic. Czech Mycol. 2004;56:19–32.

O’Donnell K, Cigelnik E. Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous. Mol Biol Evol. 1997;7:103–116. PubMed

O’Donnell K, Kistler HC, Cigelnik E, Ploetz RC. Multiple evolutionary origins of the fungus causing Panama disease of banana: concordant evidence from nuclear and mitochondrial gene genealogies. Proc Natl Acad Sci USA. 1998;95:2044–2049. doi: 10.1073/pnas.95.5.2044. PubMed DOI PMC

Rambaut A, Drummond AJ (2007) Tracer v1.4. http://beast.bio.ed.ac.uk/Tracer. Accessed 8 Mar 2019

Robert V, Vu D, Amor AB, et al. MycoBank gearing up for new horizons. IMA Fungus. 2013;4:371–379. doi: 10.5598/imafungus.2013.04.02.16. PubMed DOI PMC

Ronquist F, Huelsenbeck JP. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics. 2003;19:1572–1574. doi: 10.1093/bioinformatics/btg180. PubMed DOI

Selochnik NN, Pashenova NV, Sidorov E, Wingfield MJ, Linnakoski R. Ophiostomatoid fungi and their roles in Quercus robur die-back in Tellermann forest, Russia. Silva Fenn. 2015;49(5):16. doi: 10.14214/sf.1328. DOI

Siemaszko W. Zespoły grzybów towarzyszących kornikom polskim. Planta Pol. 1939;7:1–54.

Swofford DL. PAUP*. Phylogenetic analysis using parsimony (* and other methods). Version 4. Sunderland: Sinauer Associates; 2003.

Sydow H, Sydow P. Mykologische Mitteilungen. Ann Mycol. 1919;17:33–47.

Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol. 2013;30:2725–2729. doi: 10.1093/molbev/mst197. PubMed DOI PMC

White T, Bruns T, Lee S, Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Snisky JJ, White TJ, editors. PCR protocols: a guide to methods and applications. New York: Academic Press; 1990. pp. 315–322.

Wingfield MJ, Brockerhoff EG, Wingfield BD, Slippers B. Planted forest health: the need for a global strategy. Science. 2015;349(6250):832–836. doi: 10.1126/science.aac6674. PubMed DOI

Wingfield MJ, Barnes I, De Beer ZW, Roux J, Wingfield BD, Taerum SJ. Novel associations between ophiostomatoid fungi, insects and tree hosts: current status—future prospects. Biol Invasions. 2017;19:3215–3228. doi: 10.1007/s10530-017-1468-3. DOI

Yin M, Wingfield MJ, Zhou X, De Beer ZW. Multigene phylogenies and morphological characterization of five new Ophiostoma spp. associated with spruce-infesting bark beetles in China. Fungal Biol. 2016;120:454–470. doi: 10.1016/j.funbio.2015.12.004. PubMed DOI

Najít záznam

Citační ukazatele

Nahrávání dat ...

Možnosti archivace

Nahrávání dat ...