• This record comes from PubMed

ALK rearranged renal cell carcinoma (ALK-RCC): a multi-institutional study of twelve cases with identification of novel partner genes CLIP1, KIF5B and KIAA1217

. 2020 Dec ; 33 (12) : 2564-2579. [epub] 20200528

Language English Country United States Media print-electronic

Document type Journal Article, Multicenter Study, Research Support, Non-U.S. Gov't

ALK rearranged renal cell carcinoma (ALK-RCC) has recently been included in 2016 WHO classification as a provisional entity. In this study, we describe 12 ALK-RCCs from 8 institutions, with detailed clinical, pathological, immunohistochemical (IHC), fluorescence in situ hybridization (FISH), and next generation sequencing (NGS) analyses. Patients' age ranged from 25 to 68 years (mean, 46.3 years). Seven patients were females and five were males (M:F = 1:1.4). Tumor size ranged from 17 to 70 mm (mean 31.5, median 25 mm). The pTNM stage included: pT1a (n = 7), pT1b (n = 1), and pT3a (n = 4). Follow-up was available for 9/12 patients (range: 2 to 153 months; mean 37.6 months); 8 patients were alive without disease and one was alive with distant metastases. The tumors demonstrated heterogeneous, 'difficult to classify' morphology in 10/12 cases, typically showing diverse architectural and cellular morphologies, including papillary, tubular, tubulocystic, solid, sarcomatoid (spindle cell), rhabdoid, signet-ring cell, and intracytoplasmic vacuoles, often set in a mucinous background. Of the remaining two tumors, one showed morphology resembling mucinous tubular and spindle cell renal cell carcinoma (MTSC RCC-like) and one was indistinguishable from metanephric adenoma. One additional case also showed a focal metanephric adenoma-like area, in an otherwise heterogeneous tumor. By IHC, all tumors were diffusely positive for ALK and PAX8. In both cases with metanephric adenoma-like features, WT1 and ALK were coexpressed. ALK rearrangement was identified in 9/11 tumors by FISH. ALK fusion partners were identified by NGS in all 12 cases, including the previously reported: STRN (n = 3), TPM3 (n = 3), EML4 (n = 2), and PLEKHA7 (n = 1), and also three novel fusion partners: CLIP1 (n = 1), KIF5B (n = 1), and KIAA1217 (n = 1). ALK-RCC represents a genetically distinct entity showing a heterogeneous histomorphology, expanded herein to include unreported metanephric adenoma-like and MTSC RCC-like variants. We advocate a routine ALK IHC screening for "unclassifiable RCCs" with heterogeneous features.

See more in PubMed

Moch H, Humphrey PA, Ulbright TM, Reuter VE. WHO classification of tumours of the urinary system and male genital organs. 4th ed. Lyon, France: International Agency for Research on Cancer; 2016.

Mano H. ALKoma: a cancer subtype with a shared target. Cancer Disco. 2012;2:495–502. DOI

Hallberg B, Palmer RH. Mechanistic insight into ALK receptor tyrosine kinase in human cancer biology. Nat Rev Cancer. 2013;13:685–700. PubMed DOI

Marino-Enriquez A, Wang WL, Roy A, Lopez-Terrada D, Lazar AJ, Fletcher CD, et al. Epithelioid inflammatory myofibroblastic sarcoma: An aggressive intra-abdominal variant of inflammatory myofibroblastic tumor with nuclear membrane or perinuclear ALK. Am J Surg Pathol. 2011;35:135–44. PubMed DOI

Pulford K, Lamant L, Morris S, Butler L, Wood KM, Stroud D, et al. Detection of Anaplastic Lymphoma Kinase (ALK) and Nucleolar Protein Nucleophosmin (NPM)-ALK Proteins in Normal and Neoplastic Cells With the Monoclonal Antibody ALK1. Blood. 1997;89:1394–404. PubMed DOI

Marino-Enriquez A, Ou WB, Weldon CB, Fletcher JA, Perez-Atayde AR. ALK rearrangement in sickle cell trait-associated renal medullary carcinoma. Genes Chromosomes Cancer. 2011;50:146–53. PubMed DOI

Debelenko LV, Raimondi SC, Daw N, Shivakumar BR, Huang D, Nelson M, et al. Renal cell carcinoma with novel VCL-ALK fusion: new representative of ALK-associated tumor spectrum. Mod Pathol. 2011;24:430–42. PubMed DOI

Sugawara E, Togashi Y, Kuroda N, Sakata S, Hatano S, Asaka R, et al. Identification of anaplastic lymphoma kinase fusions in renal cancer: large-scale immunohistochemical screening by the intercalated antibody-enhanced polymer method. Cancer. 2012;118:4427–36. PubMed DOI

Sukov WR, Hodge JC, Lohse CM, Akre MK, Leibovich BC, Thompson RH, et al. ALK alterations in adult renal cell carcinoma: frequency, clinicopathologic features and outcome in a large series of consecutively treated patients. Mod Pathol. 2012;25:1516–25. PubMed DOI

Lee C, Park JW, Suh JH, Nam KH, Moon KC. ALK-Positive Renal Cell Carcinoma in a Large Series of Consecutively Resected Korean Renal Cell Carcinoma Patients. Korean J Pathol. 2013;47:452–7. PubMed DOI PMC

Smith NE, Deyrup AT, Marino-Enriquez A, Fletcher JA, Bridge JA, Illei PB, et al. VCL-ALK renal cell carcinoma in children with sickle-cell trait: the eighth sickle-cell nephropathy? Am J Surg Pathol. 2014;38:858–63. PubMed DOI PMC

Ryan C, Mayer N, Cunningham J, Hislop G, Pratt N, Fleming S. Increased ALK1 copy number and renal cell carcinoma-a case report. Virchows Arch. 2014;464:241–5. PubMed DOI

Cajaiba MM, Jennings LJ, Rohan SM, Perez-Atayde AR, Marino-Enriquez A, Fletcher JA, et al. ALK-rearranged renal cell carcinomas in children. Genes Chromosomes Cancer. 2016;55:442–51. PubMed DOI

Cajaiba MM, Jennings LJ, George D, Perlman EJ. Expanding the spectrum of ALK-rearranged renal cell carcinomas in children: identification of a novel HOOK1-ALK fusion transcript. Genes Chromosomes Cancer. 2016;55:814–7. PubMed DOI PMC

Thorner PS, Shago M, Marrano P, Shaikh F, Somers GR. TFE3-positive renal cell carcinomas are not always Xp11 translocation carcinomas: Report of a case with a TPM3-ALK translocation. Pathol Res Pract. 2016;212:937–42. PubMed DOI

Kusano H, Togashi Y, Akiba J, Moriya F, Baba K, Matsuzaki N, et al. Two Cases of Renal Cell Carcinoma Harboring a Novel STRN-ALK Fusion Gene. Am J Surg Pathol. 2016;40:761–9. PubMed DOI

Jeanneau M, Gregoire V, Desplechain C, Escande F, Tica DP, Aubert S, et al. ALK rearrangements-associated renal cell carcinoma (RCC) with unique pathological features in an adult. Pathol Res Pract. 2016;212:1064–6. PubMed DOI

Oyama Y, Nishida H, Kusaba T, Kadowaki H, Arakane M, Daa T, et al. A case of anaplastic lymphoma kinase-positive renal cell carcinoma coincident with Hodgkin lymphoma. Pathol Int. 2017;67:626–31. PubMed DOI

Yu W, Wang Y, Jiang Y, Zhang W, Li Y. Genetic analysis and clinicopathological features of ALK-rearranged renal cell carcinoma in a large series of resected Chinese renal cell carcinoma patients and literature review. Histopathology. 2017;71:53–62. PubMed DOI

Bodokh Y, Ambrosetti D, Kubiniek V, Tibi B, Durand M, Amiel J, et al. ALK-TPM3 rearrangement in adult renal cell carcinoma: report of a new case showing loss of chromosome 3 and literature review. Cancer Genet. 2018;221:31–7. PubMed DOI

Yang J, Dong L, Du H, Li XB, Liang YX, Liu GR. ALK-TPM3 rearrangement in adult renal cell carcinoma: a case report and literature review. Diagn Pathol. 2019;14:112. PubMed DOI PMC

Wang XT, Fang R, Ye SB, Zhang RS, Li R, Wang X, et al. Targeted next-generation sequencing revealed distinct clinicopathologic and molecular features of VCL-ALK RCC: a unique case from an older patient without clinical evidence of sickle cell trait. Pathol Res Pract. 2019;215:152651. PubMed DOI

Pal SK, Bergerot P, Dizman N, Bergerot C, Adashek J, Madison R, et al. Responses to alectinib in ALK-rearranged papillary renal cell carcinoma. Eur Urol. 2018;74:124–8. PubMed DOI

Trpkov K, Hes O. New and emerging renal entities: a perspective post-WHO 2016 classification. Histopathology. 2019;74:31–59. PubMed DOI

Siadat F, Trpkov K. ESC, ALK, HOT and LOT: Three letter acronyms of emerging renal entities knocking on the door of the WHO classification. Cancers (Basel) 2020;12:168. DOI

Tao J, Wei G, Patel R, Fagan P, Hao X, Bridge J, et al. ALK fusions in renal cell carcinoma: response to entrectinib. JCO Precis Oncol. 2018;2:1–8. PubMed

Chen YB, Xu J, Skanderup AJ, Dong Y, Brannon AR, Wang L, et al. Molecular analysis of aggressive renal cell carcinoma with unclassified histology reveals distinct subsets. Nat Commun. 2016;7:13131. PubMed DOI PMC

Hang JF, Chung HJ, Pan CC. ALK-rearranged renal cell carcinoma with a novel PLEKHA7-ALK translocation and metanephric adenoma-like morphology. Vinchows Arch. 2020. [Online ahead of print].

Tretiakova MS, Wang W, Wu Y, Tykodi SS, True L, Liu YJ. Gene fusion analysis in renal cell carcinoma by FusionPlex RNA-sequencing and correlations of molecular findings with clinicopathological features. Genes Chromosomes Cancer 2019, [Online ahead of print].

Agaimy A, Moskalev EA, Weisser W, Bach T, Haller F, Hartmann A. Low-grade endometrioid stromal sarcoma of the paratestis: a novel report with molecular confirmation of JAZF1/SUZ12 translocation. Am J Surg Pathol. 2018;42:695–700. PubMed DOI

Sobin LH, Gospodarowicz M, Wittekind C. International union against cancer. TNM classification of malignant tumours. 7th ed. New York, NY: Wiley-Liss; 2009.

Gorczynski A, Czapiewski P, Korwat A, Budynko L, Prelowska M, Okon K, et al. ALK-rearranged renal cell carcinomas in Polish population. Pathol Res Pract. 2019;215:152669. PubMed DOI

Pulimeno P, Bauer C, Stutz J, Citi S. PLEKHA7 is an adherens junction protein with a tissue distribution and subcellular localization distinct from ZO-1 and E-cadherin. PLoS One. 2010;5:e12207. PubMed DOI PMC

Weisbrich A, Honnappa S, Jaussi R, Okhrimenko O, Frey D, Jelesarov I, et al. Structure-function relationship of CAP-Gly domains. Nat Struct Mol Biol. 2007;14:959–67. PubMed DOI

Navone F, Niclas J, Hom-Booher N, Sparks L, Bernstein HD, McCaffrey G, et al. Cloning and expression of a human kinesin heavy chain gene: interaction of the COOH-terminal domain with cytoplasmic microtubules in transfected CV-1 cells. J Cell Biol. 1992;117:1263–75. PubMed DOI

Nagase T, Ishikawa K, Kikuno R, Hirosawa M, Nomura N, Ohara O. Prediction of the coding sequences of unidentified human genes. XV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. DNA Res. 1999;6:337–45. PubMed DOI

Yeh I, de la Fouchardiere A, Pissaloux D, Mully TW, Garrido MC, Vemula SS, et al. Clinical, histopathologic, and genomic features of Spitz tumors with ALK fusions. Am J Surg Pathol. 2015;39:581–91. PubMed DOI PMC

Vendrell JA, Taviaux S, Beganton B, Godreuil S, Audran P, Grand D, et al. Detection of known and novel ALK fusion transcripts in lung cancer patients using next-generation sequencing approaches. Sci Rep. 2017;7:12510. PubMed DOI PMC

Maruggi M, Malicki DM, Levy ML, Crawford JR. A novel KIF5B-ALK fusion in a child with an atypical central nervous system inflammatory myofibroblastic tumour. BMJ Case Rep. 2018;2018:bcr2018226431. DOI PMC

Lee MS, Kim RN, I H, Oh DY, Song JY, Noh KW, et al. Identification of a novel partner gene, KIAA1217, fused to RET: functional characterization and inhibitor sensitivity of two isoforms in lung adenocarcinoma. Oncotarget. 2016;7:36101–14. PubMed DOI PMC

Choueiri TK, Cheville J, Palescandolo E, Fay AP, Kantoff PW, Atkins MB, et al. BRAF mutations in metanephric adenoma of the kidney. Eur Urol. 2012;62:917–22. PubMed DOI PMC

Udager AM, Pan J, Magers MJ, Palapattu GS, Morgan TM, Montgomery JS, et al. Molecular and immunohistochemical characterization reveals novel BRAF mutations in metanephric adenoma. Am J Surg Pathol. 2015;39:549–57. PubMed DOI PMC

Trpkov K, Hes O, Agaimy A, Bonert M, Martinek P, Magi-Galluzzi C, et al. Fumarate hydratase-deficient renal cell carcinoma is strongly correlated with fumarate hydratase mutation and hereditary leiomyomatosis and renal cell carcinoma syndrome. Am J Surg Pathol. 2016;40:865–75. PubMed DOI

Muller M, Guillaud-Bataille M, Salleron J, Genestie C, Deveaux S, Slama A, et al. Pattern multiplicity and fumarate hydratase (FH)/S-(2-succino)-cysteine (2SC) staining but not eosinophilic nucleoli with perinucleolar halos differentiate hereditary leiomyomatosis and renal cell carcinoma-associated renal cell carcinomas from kidney tumors without FH gene alteration. Modern Pathol. 2018, [Online ahead of print].

Takeuchi K, Soda M, Togashi Y, Suzuki R, Sakata S, Hatano S, et al. RET, ROS1 and ALK fusions in lung cancer. Nat Med. 2012;18:378–81. PubMed DOI

Kuroda N, Ohara M, Wada Y, Yasuoka K, Mizuno K, Yorita K, et al. Cytological features in eight patients with ALK-rearranged lung cancer. Diagnostic Cytopathol. 2018;46:516–9. DOI

Find record

Citation metrics

Loading data ...

Archiving options

Loading data ...