Novel Virus on Filamentous Arthronema africanum Cyanobacterium
Jazyk angličtina Země Spojené státy americké Médium print-electronic
Typ dokumentu časopisecké články
Grantová podpora
RVO60077344
institutional support
RVO67985939
institutional support
Biocirtech T01000048
Technologická Agentura České Republiky
PubMed
32901386
DOI
10.1007/s00248-020-01599-2
PII: 10.1007/s00248-020-01599-2
Knihovny.cz E-zdroje
- Klíčová slova
- Complete sequence, Podophage, Podovirus,
- MeSH
- bakteriofágy klasifikace genetika fyziologie MeSH
- délka genomu MeSH
- DNA virů genetika MeSH
- fylogeneze MeSH
- genom virový genetika MeSH
- hostitelská specificita MeSH
- lyzogenie MeSH
- Podoviridae klasifikace genetika fyziologie MeSH
- sekvence aminokyselin MeSH
- sekvenční analýza DNA MeSH
- sinice virologie MeSH
- sladká voda mikrobiologie MeSH
- virové proteiny genetika MeSH
- zastoupení bazí MeSH
- Publikační typ
- časopisecké články MeSH
- Názvy látek
- DNA virů MeSH
- virové proteiny MeSH
Widely distributed in water environments and in soil, cyanobacteria are hosts of lysogenic or lytic bacterioviruses. A novel, probably lysogenic virus (phage) for which the name Arthronema africanum virus TR020 (Aa-TR020) is proposed, has been isolated from filamentous freshwater cyanobacterium Arthronema africanum. The virus formed turbid plaques on plate culture of A. africanum strain 1980/01 but not on other Arthronema strain and other bacterial species. The genome of Aa-TR020 is linear molecule of dsDNA, 44,805 bp in length with 216 bp long terminal repeats and with G + C content of 46%. Fifty-five genes organized on plus and minus strands were predicted there. The genome size, gene arrangement, and selected protein sequences showed relatedness to Phormidium virus Pf-WMP3 and other viruses known to infect cyanobacteria and classified in the family Podoviridae.
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