Data Descriptor: Pacific Introduced Flora (PaciFLora)
Status PubMed-not-MEDLINE Jazyk angličtina Země Bulharsko Médium electronic-ecollection
Typ dokumentu časopisecké články
Grantová podpora
I 2086
Austrian Science Fund FWF - Austria
I 3757
Austrian Science Fund FWF - Austria
PubMed
34385884
PubMed Central
PMC8316249
DOI
10.3897/bdj.9.e67318
PII: 67318
Knihovny.cz E-zdroje
- Klíčová slova
- Island Biogeography, Pacific Ocean, naturalised species, plant invasion, species database,
- Publikační typ
- časopisecké články MeSH
BACKGROUND: The Pacific Region has the highest density of naturalised plant species worldwide, which makes it an important area for research on the ecology, evolution and biogeography of biological invasions. While different data sources on naturalised plant species exist for the Pacific, there is no taxonomically and spatially harmonised database available for different subsets of species and islands. A comprehensive, accessible database containing the distribution of naturalised vascular plant species in the Pacific will enable new basic and applied research for researchers and will be an important information source for practitioners working in the Region. NEW INFORMATION: Here, we present PacIFlora, an updated and taxonomically standardised list of naturalised species, their unified nativeness, cultivation and invasive status and their distribution across the Pacific Ocean, including harmonised location denoination. This list is based on the two largest databases on naturalised plants for the Region, specifically the Pacific Island Ecosystems at Risk (PIER) and the Global Naturalised Alien Flora (GloNAF) databases. We provide an outlook for how this database can contribute to numerous research questions and conservation efforts.
Durham University Durham United Kingdom Durham University Durham United Kingdom
German Centre for Integrative Biodiversity Research Halle Jena Leipzig Leipzig Germany
Institute of Biology Martin Luther University Halle Wittenberg Halle Germany
Institute of Botany Průhonice Czech Republic Institute of Botany Průhonice Czech Republic
Pacific Southwest Research Station USDA Forest Service Sun Lakes United States of America
Senckenberg Biodiversity and Climate Research Centre Frankfurt am Main Germany
Universidad Mayor Santiago Chile Universidad Mayor Santiago Chile
University of Konstanz Konstanz Germany University of Konstanz Konstanz Germany
Zobrazit více v PubMed
Barbosa A. M. fuzzySim: applying fuzzy logic to binary similarity indices in ecology. Methods in Ecolology and Evolution. 2015;6:853–858. doi: 10.1111/2041-210X.12372. DOI
Blackburn T. M., Pyek P., Bacher S., Carlton J. T., Duncan R. P., Jarok V., et al. A proposed unified framework for biological invasions. Trends in Ecology and Evolution. 2011;26:333–339. doi: 10.1016/j.tree.2011.03.023. PubMed DOI
Chamberlain S., Bartomeus I. originr: Fetch Species Origin Data from the Web 2020
Foundation Charles Darwin. Database inventory of introduced plant species in the rural and urban zones of Galapagos. Charles Darwin Foundation; Galapagos, Ecuador: 2008.
Florence J. Flore de la Polynésie française. Vol. 2. IRE Editions, Publications Scientifiques, Collection Faune et Flore Tropicales; Paris: 2004. 503 pp.
Florence J., Chevillotte H., Ollier C., Meyer J. Y. Base de données botaniques Nadeaud de l'Herbier de la Polynésie française (PAP) https://inpn.mnhn.fr/espece/inventaire/I220. [2011-07-01T00:00:00+03:00];
Florence J., Chevillotte H., Ollier C., Meyer J. -Y. Base de données botaniques Nadeaud de l'Herbier de la Polynésie Française (PAP). (online resource) https://nadeaud.ilm.pf/
Fosberg F. R., Sachet Marie-Helene, Oliver Royce. A geographical checklist of the Micronesian dicotyledonae. Micronesica. 1979;15:1–295.
Fosberg F. R., Sachet Marie-Helene, Oliver Royce. A geographical checklist of the Micronesian monocotyledonae. Micronesica. 1987;20:1–126.
Freiberg M., Winter M., Gentile A., Zizka A., Muellner-Riehl A. N., Weigelt A., et al. The Leipzig Catalogue of Vascular Plants (LCVP). An improved taxonomic reference list for all known vascular plants. bioRxiv. 2020;2 020.05.08.077149 PubMed PMC
Gargominy O., Tercerie S., Régnier C., Ramage T., Dupont P., Vandel E., Daszkiewicz P., Léotard G., Courtecuisse R., Canard A., Lévêque A., Leblond S., De Massary J. -C., Jourdan H., Dewynter M., Horellou A., Noël P., Noblecourt T., Comolet J., Touroult J., Barbut J., Rome Q., Delfosse E., Bernard J. -F., Bock B., Malécot V., Boullet V., Hugonnot V., Gradstein S. R., Bernard E. L., Ah-Peng A., Moreau P. A., Lebouvier M. TAXREF v12.0, référentiel taxonomique pour la France. Muséum national d'Histoire naturelle, Paris. https://inpn.mnhn.fr/telechargement/referentielEspece/taxref/12.0/menu. [2019-02-13T00:00:00+02:00];
Guézou A., Chamorro S., Pozo P., Guerrero A. M., Atkinson R., Buddenhagen C., Jaramillo Díaz P., Gardener M. CDF Checklist of Galapagos Introduced Plants. In: Bungartz F., Herrera H., Jaramillo P., Tirado N., Jiménez-Uzcátegui G., Ruiz D., Guézou A., Ziemmeck F., editors. Charles Darwin Foundation Galapagos Species Checklist. Charles Darwin Foundation; Puerto Ayora, Galapagos.: 2014.
Hulme P. E., Bacher S., Kenis M., Klotz S., Khn I., Minchin D., et al. Grasping at the routes of biological invasions: A framework for integrating pathways into policy. Journal of Applied Ecology. 2008;45:403–414. doi: 10.1111/j.1365-2664.2007.01442.x. DOI
Imada C. T. Hawaiian Naturalized Vascular Plants Checklist. Bishop Museum Technical Report. 2019;69
ISSG. Invasive Species Specialist Group. GRIIS - Global Register of Introduced and Invasive Species. http://www.griis.org. [2019-07-30T00:00:00+03:00];
Kattge J., Diaz S., Lavorel S., Prentice I. C., Leadley P., Bnisch G., et al. TRY a global database of plant traits. Global Change Biology. 2011;17:2905–2935. doi: 10.1111/j.1365-2486.2011.02451.x. DOI
Lorence David H., Wagner Warren L. National Tropical Botanical Garden and the Smithsonian Institution; 2013. Flora of the Marquesas Islands.
MacKee H. S. Catalogue des plantes introduites et cultivées en Nouvelle-Calédonie. Muséum National d'Histoire Naturelle; Paris: 1994. 164. French.
Maitner B. BIEN: Tools for Accessing the Botanical Information and Ecology Network Database. 2020
Matisoo-Smith E., Robinson J. H. Origins and dispersals of Pacific peoples: Evidence from mtDNA phylogenies of the Pacific rat. PNAS. 2004;101(24):9167–9172. doi: 10.1073/pnas.0403120101. English. PubMed DOI PMC
McCormack Gerald. Cook Islands Natural Heritage Trust, Rarotonga; 2007. Cook Islands Biodiversity Database. 2007.2.
McCormack Gerald. Cook Islands Biodiversity Database 2013
Council National Oceanic and Atmospheric Administration & Western Pacific Regional Fishery Management. Toward an ecosystem approach for the Western Pacific Region: from species-based fishery management plans to place-based fishery ecosystem plans: Environmental impact statement. Evanston: 2009.
Pearse W. D., Cadotte M. W., Cavender-Bares J., Ives A. R., Tucker C. M., Walker S. C., et al. Pez: Phylogenetics for the environmental sciences. Bioinformatics. 2015;31:2888–2890. doi: 10.1093/bioinformatics/btv277. PubMed DOI
Pyek P., Pergl J., Essl F., Lenzner B., Dawson W., Kreft H., et al. Naturalized alien flora of the world: Species diversity, taxonomic and phylogenetic patterns, geographic distribution and global hotspots of plant invasion. Preslia. 2017;89:203–274. doi: 10.23855/preslia.2017.203. DOI
Team QGIS Development. Open Source Geospatial Foundation Project; 2021. QGIS Geographic Information System. 3.12.3.
Raulerson L. Checklist of plants of the Mariana Islands. University of Guam Herbarium Contribution. 2006;37:1–6.
Team R Core. R - A language and environment for statistical computing. 2020 4.0.3.
Richardson D. M., Pysek P., Rejmnek M., Barbour M. G., Panetta F. D., West C. J. Naturalization and invasion of alien plants: concepts and definitions. Diversity and Distributions. 2000;6:93–107. doi: 10.1046/j.1472-4642.2000.00083.x. DOI
Seebens H., Blackburn T. M., Dyer E. E., Genovesi P., Hulme P. E., Jeschke J. M., et al. No saturation in the accumulation of alien species worldwide. Nature Communications. 2017;8:1–9. PubMed PMC
Seidel Henrike, Lal Padma N. Economic Value of the Pacific Ocean to the Pacific Island Coutnries and Territiories. IUCN Oceania. 2010:1–74. English.
Smith S. A., Brown J. W. Constructing a broadly inclusive seed plant phylogeny. American Journal of Botany. 2018;105:302–314. doi: 10.1002/ajb2.1019. PubMed DOI
South A. rnaturalearth: World Map Data from Natural Earth. 2017
Space James C., Waterhouse Barbara, Miles Joel E., Tiobech Joseph, Rengulbai Kashgar. Report to the Republic of Palau on invasive plant species of environmental concern. USDA Forest Service; Honolulu: 2003. 174
Swarbrick John T. Weeds of the Pacific Islands. South Pacific Commission Technical papers. 1997;209:1–124.
van Kleunen M., Dawson W., Essl F., Pergl J., Winter M., Weber E., et al. Global exchange and accumulation of non-native plants. Nature. 2015;525:100–103. doi: 10.1038/nature14910. PubMed DOI
van Kleunen M., Pyek P., Dawson W., Essl F., Kreft H., Pergl J., et al. The Global Naturalized Alien Flora (GloNAF) database. Ecology. 2019;100:1–2. PubMed
van Kleunen M., Xu X., Yang Q., Maurel N., Zhang Z., Dawson W., et al. Economic use of plants is key to their naturalization success. Nature Communications. 2020;11 PubMed PMC
Wagner Warren, Herbst Derral R., Sohmer S. H. Manual of the flowering plants of Hawaii. Revised edition. Bishop Museum Special Publication. 1999:1–1919.
Wagner W. L., Lorence D. H. Flora of the Marquesas Islands website. http://botany.si.edu/pacificislandbiodiversity/marquesasflora/index.htm. [2014-11-28T00:00:00+02:00];
Weigelt P., Jetz W., Kreft H. Bioclimatic and physical characterization of the worlds islands. Proceedings of the National Academy of Sciences of the United States of America. 2013;110:15307–15312. doi: 10.1073/pnas.1306309110. PubMed DOI PMC
Weigelt P., König C., Kreft H. GIFT A Global Inventory of Floras and Traits for macroecology and biogeography. Journal of Biogeography. 2019;47:16–43. doi: 10.1111/jbi.13623. DOI
Welsh S. L. Flora Societensis: A summary revision of the flowering plants of the Society Islands. E.P.S. Inc.; Orem, Utah: 1998. 420
Whistler W. A. A study of the rare plants of American Samoa. The U.S. Fish and Wildlife Service; Honolulu, Hawaii: 1998.
Wickham H. ggplot2: Elegant graphics for data analysis. Springer-Verlag; 2016. DOI
Wohlwend M. R., Craven D., Weigelt P., Seebens H., Winter M., Kreft H., et al. Anthropogenic and environmental drivers shape diversity of naturalized plants across the Pacific. Diversity and Distributions. 2021:1–14. doi: 10.1111/ddi.13260. DOI
Yu G. Using ggtree to visualize data on TreeLike structures. Current Protocols in Bioinforma. 2020;69 PubMed
Yuncker T. G. Plants of Tonga. Bishop Museum Bull. 1959;220:1–343.