Intermolecular Covalent Interactions: Nature and Directionality

. 2023 Mar 07 ; 29 (14) : e202203791. [epub] 20230130

Status PubMed-not-MEDLINE Jazyk angličtina Země Německo Médium print-electronic

Typ dokumentu časopisecké články

Perzistentní odkaz   https://www.medvik.cz/link/pmid36478415

Grantová podpora
FAPEMIG Fundação de Amparo à Pesquisa do Estado de Minas Gerais
CAPES Coordenação de Aperfeiçoamento de Pessoal de Nível Superior
NWO Nederlandse Organisatie voor Wetenschappelijk Onderzoek

Quantum chemical methods were employed to analyze the nature and the origin of the directionality of pnictogen (PnB), chalcogen (ChB), and halogen bonds (XB) in archetypal Fm Z⋅⋅⋅F- complexes (Z=Pn, Ch, X), using relativistic density functional theory (DFT) at ZORA-M06/QZ4P. Quantitative Kohn-Sham MO and energy decomposition analyses (EDA) show that all these intermolecular interactions have in common that covalence, that is, HOMO-LUMO interactions, provide a crucial contribution to the bond energy, besides electrostatic attraction. Strikingly, all these bonds are directional (i.e., F-Z⋅⋅⋅F- is approximately linear) despite, and not because of, the electrostatic interactions which, in fact, favor bending. This constitutes a breakdown of the σ-hole model. It was shown how the σ-hole model fails by neglecting both, the essential physics behind the electrostatic interaction and that behind the directionality of electron-rich intermolecular interactions. Our findings are general and extend to the neutral, weaker ClI⋅⋅⋅NH3 , HClTe⋅⋅⋅NH3 , and H2 ClSb⋅⋅⋅NH3 complexes.

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In Figure 6a, VS,max is ca. 1.8 Å from Cl along the molecular axis of FCl for isovalue of 0.001 a.u. In Figure 6b, VS,max is ca. 0.8 and 2.8 Å from Cl along the molecular axis of FCl for isovalues of 0.08 and 0.00001 a.u., respectively. For F−, the surface is ca. 0.5, 0.6, and 1.8 Å from the nucleus for isovalues of 0.4, 0.26, and 0.001 a.u., respectively.

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