Co-infection of mammarenaviruses in a wild mouse, Tanzania

. 2022 ; 8 (2) : veac065. [epub] 20220725

Status PubMed-not-MEDLINE Jazyk angličtina Země Anglie, Velká Británie Médium electronic-ecollection

Typ dokumentu časopisecké články

Perzistentní odkaz   https://www.medvik.cz/link/pmid36533140

Mammarenaviruses are bi-segmented RNA viruses. They encompass viruses responsible for several severe diseases in humans. While performing a de novo assembly of a new virus found in a wild single-striped grass mouse in Tanzania, we found a single S but two divergent L segments. Natural co-infections, common within reptarenaviruses in captivity, were never reported for mammarenaviruses and never in a wild sample. This finding can have implications for virus evolution as co-infection could trigger viral recombination/reassortment in natural reservoirs.

Zobrazit více v PubMed

Alfaro-Alarcón A. et al. (2022) ‘Boid Inclusion Body Disease (BIBD) Is also a Disease of Wild Boa Constrictors’, BioRxiv [Preprint] <10.1101/2022.04.25.489483> accessed 1 Jun 2022. PubMed DOI PMC

Andersen K. G., et al. (2015) ‘Clinical Sequencing Uncovers Origins and Evolution of Lassa Virus’, Cell, 162: 738–50. PubMed PMC

Bao Y., Chetvernin V., and Tatusova T. (2014) ‘Improvements to Pairwise Sequence Comparison (PASC): A Genome-Based Web Tool for Virus Classification’, Archives of Virology, 159: 3293–304. PubMed PMC

Buchfink B., Xie C., and Huson D. H. (2015) ‘Fast and Sensitive Protein Alignment Using DIAMOND’, Nature Methods, 12: 59–60. PubMed

Cuypers L. N. et al. (2020) ‘Three Arenaviruses in Three Subspecific Natal Multimammate Mouse Taxa in Tanzania: Same Host Specificity, But Different Spatial Genetic Structure?’, Virus Evolution, 6: veaa039. PubMed PMC

Fernandes J. et al. (2018) ‘Xapuri Virus, a Novel Mammarenavirus: Natural Reassortment and Increased Diversity between New World Viruses’, Emerging Microbes & Infections, 7: 120. PubMed PMC

Goüy de Bellocq J. et al. (2010) ‘Sympatric Occurrence of 3 Arenaviruses, Tanzania’, Emerging Infectious Diseases, 16: 692–5. PubMed PMC

Hepojoki J. et al. (2015) ‘Arenavirus Coinfections Are Common in Snakes with Boid Inclusion Body Disease’, Journal of Virology, 89: 8657–60. PubMed PMC

Jiang H. et al. (2014) ‘Skewer: A Fast and Accurate Adapter Trimmer for Next-generation Sequencing Paired-End Reads’, BMC Bioinformatics, 15: 182. PubMed PMC

Laetsch D., and Blaxter M. (2017) ‘BlobTools: Interrogation of Genome Assemblies’, F1000Research, 6: 1287.

Lukashevich I. S. (1992) ‘Generation of Reassortants between African Arenaviruses’, Virology, 188: 600–5. PubMed

Miller M. A., Pfeiffer W., and Swartz T. (2010) ‘Creating the CIPRES Science Gateway for Inference of Large Phylogenetic Trees’, in Proceedings of the Gateway Computing Environments Workshop (GCE), Nov14; New Orleans, LA, pp. 1–8.

Nurk S. et al. (2017) ‘metaSPAdes: A New Versatile Metagenomic Assembler’, Genome Research, 27: 824–34. PubMed PMC

Radoshitzky S. R. et al. (2019) ‘ICTV Virus Taxonomy Profile: Arenaviridae’, The Journal of General Virology, 100: 1200–1. PubMed

Ronquist F. et al. (2012) ‘MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice across a Large Model Space’, Systematic Biology, 61: 539–42. PubMed PMC

Stenglein M. D. et al. (2015) ‘Widespread Recombination, Reassortment, and Transmission of Unbalanced Compound Viral Genotypes in Natural Arenavirus Infections’, PLoS Pathogens, 11: e1004900. PubMed PMC

Těšíková J., Krásová J., and Goüy de Bellocq J. (2021) ‘Multiple Mammarenaviruses Circulating in Angolan Rodents’, Viruses, 13: 982. PubMed PMC

Vijaykrishna D., Mukerji R., and Smith G. J. D. (2015) ‘RNA Virus Reassortment: An Evolutionary Mechanism for Host Jumps and Immune Evasion’, PLoS Pathogens, 11: e1004902. PubMed PMC

Najít záznam

Citační ukazatele

Nahrávání dat ...

Možnosti archivace

Nahrávání dat ...