Human Endogenous Retroviruses in Breast Cancer: Altered Expression Pattern Implicates Divergent Roles in Carcinogenesis
Jazyk angličtina Země Švýcarsko Médium print-electronic
Typ dokumentu časopisecké články
PubMed
38408442
PubMed Central
PMC11449185
DOI
10.1159/000538021
PII: 000538021
Knihovny.cz E-zdroje
- Klíčová slova
- Breast cancer, ERV3-1, ERVFRD-1, ERVH48-1, ERVK13-1, ERVK3-1, ERVMER34-1, ERVV-1, ERVW-1, HCP5, Human endogenous retroviruses,
- MeSH
- dospělí MeSH
- endogenní retroviry * genetika MeSH
- karcinogeneze * genetika MeSH
- lidé středního věku MeSH
- lidé MeSH
- nádorové biomarkery genetika metabolismus MeSH
- nádory prsu * virologie patologie genetika MeSH
- regulace genové exprese u nádorů MeSH
- senioři MeSH
- Check Tag
- dospělí MeSH
- lidé středního věku MeSH
- lidé MeSH
- senioři MeSH
- ženské pohlaví MeSH
- Publikační typ
- časopisecké články MeSH
- Názvy látek
- nádorové biomarkery MeSH
INTRODUCTION: Breast cancer is the most common cancer and the leading cause of cancer death in women. Recent research indicates that human endogenous retroviruses (HERVs) may be linked to carcinogenesis, but the data remain controversial. METHODS: HERVs' expression was evaluated to show the differences between breast cancer and control samples, and their associations with clinicopathological parameters. Gene expression of 12 HERVs, i.e., ERVE-4, ERVW-1, ERVFRD-1, ERVV-1, ERV3-1, ERVH48-1, ERVMER34-1, ERVK-7, ERVK13-1, ERVK11-1, ERVK3-1, and HCP5, was analyzed by qPCR and/or TCGA datasets for breast cancer. RESULTS: ERV3-1, ERVFRD-1, ERVH48-1, and ERVW-1 provided data to support their tumor suppressor roles in breast cancer. ERV3-1 evinced the best performing diagnostic data based on qPCR, i.e. , AUC: 0.819 (p < 0.0001), sensitivity of 72.41%, and specificity of 89.66%. Lower levels of ERV3-1 were noted in advanced stage and higher grades, and significant negative association was found in relation to Ki-67 levels. Oncogenic roles may be inferred for ERVK13-1, ERVV-1, and ERVMER34-1. Data for ERVK-7, ERVE-4, ERVK11-1, and HCP5 remain inconclusive. CONCLUSION: Differential HERV expression may be applicable to evaluate novel biomarkers for breast cancer. However, more research is needed to reveal their real clinical impact, the biological roles, and regulatory mechanisms in breast carcinogenesis.
Department of Obstetrics and Gynecology Masaryk University and University Hospital Brno Brno Czechia
Zobrazit více v PubMed
Sung H, Ferlay J, Siegel RL, Laversanne M, Soerjomataram I, Jemal A, et al. . Global cancer statistics 2020: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries. CA Cancer J Clin. 2021;71(3):209–49. PubMed
Tadesse GF, Tegaw EM, Abdisa EK. Diagnostic performance of mammography and ultrasound in breast cancer: a systematic review and meta-analysis. J Ultrasound. 2023;26(2):355–67. PubMed PMC
Lother D, Robert M, Elwood E, Smith S, Tunariu N, Johnston SRD, et al. . Imaging in metastatic breast cancer, CT, PET/CT, MRI, WB-DWI, CCA: review and new perspectives. Cancer Imag. 2023;23(1):53. PubMed PMC
Najjar S, Allison KH. Updates on breast biomarkers. Virchows Arch. 2022;480(1):163–76. PubMed
Armstrong N, Ryder S, Forbes C, Ross J, Quek RGW. A systematic review of the international prevalence of BRCA mutation in breast cancer. Clin Epidemiol. 2019;11:543–61. PubMed PMC
Hanahan D. Hallmarks of cancer: new dimensions. Cancer Discov. 2022;12(1):31–46. PubMed
Ouyang YF, Lu WX, Wang Y, Wang BT, Li FY, Li XH, et al. . Integrated analysis of mRNA and extrachromosomal circular DNA profiles to identify the potential mRNA biomarkers in breast cancer. Gene. 2023;857:147174. PubMed
Ortiz MMO, Andrechek ER. Molecular characterization and landscape of breast cancer models from a multi-omics perspective. J Mammary Gland Biol Neoplasia. 2023;28(1):12. PubMed PMC
Volovat SR, Volovat C, Hordila I, Hordila DA, Mirestean CC, Miron OT, et al. . MiRNA and LncRNA as potential biomarkers in triple-negative breast cancer: a review. Front Oncol. 2020;10:526850. PubMed PMC
Padroni L, De Marco L, Dansero L, Fiano V, Milani L, Vasapolli P, et al. . An epidemiological systematic review with meta-analysis on biomarker role of circulating MicroRNAs in breast cancer incidence. Int J Mol Sci. 2023;24(4):3910. PubMed PMC
Bannert N, Kurth R. Retroelements and the human genome: new perspectives on an old relation. Proc Natl Acad Sci U S A. 2004;101(Suppl 2):14572–9. PubMed PMC
Hohn O, Hanke K, Bannert N. HERV-K(HML-2), the best preserved family of HERVs: endogenization, expression, and implications in health and disease. Front Oncol. 2013;3:246. PubMed PMC
Grandi N, Tramontano E. Type W Human Endogenous Retrovirus (HERV-W) integrations and their mobilization by L1 machinery: contribution to the human transcriptome and impact on the host physiopathology. Viruses. 2017;9(7):162. PubMed PMC
Petrizzo A, Ragone C, Cavalluzzo B, Mauriello A, Manolio C, Tagliamonte M, et al. . Human endogenous retrovirus reactivation: implications for cancer immunotherapy. Cancers. 2021;13(9):1999. PubMed PMC
Stricker E, Peckham-Gregory EC, Scheurer ME. HERVs and cancer-A comprehensive review of the relationship of human endogenous retroviruses and human cancers. Biomedicines. 2023;11(3):936. PubMed PMC
Zapatka M, Borozan I, Brewer DS, Iskar M, Grundhoff A, Alawi M, et al. . The landscape of viral associations in human cancers. Nat Genet. 2020;52(3):320–30. PubMed PMC
Mulherkar TH, Gomez DJ, Sandel G, Jain P. Co-infection and cancer: host-pathogen interaction between dendritic cells and HIV-1, HTLV-1, and other oncogenic viruses. Viruses. 2022;14(9):2037. PubMed PMC
Kitsou K, Lagiou P, Magiorkinis G. Human endogenous retroviruses in cancer: oncogenesis mechanisms and clinical implications. J Med Virol. 2023;95(1):e28350. PubMed PMC
Johanning GL, Malouf GG, Zheng XF, Esteva FJ, Weinstein JN, Wang-Johanning F, et al. . Expression of human endogenous retrovirus-K is strongly associated with the basal-like breast cancer phenotype. Sci Rep. 2017;7:41960. PubMed PMC
Tavakolian S, Goudarzi H, Faghihloo E. Evaluating the expression level of HERV-K env, np9, rec and gag in breast tissue. Infect Agent Cancer. 2019;14(1):42. PubMed PMC
Tourang M, Fang L, Zhong Y, Suthar RS. Association between Human Endogenous Retrovirus K gene expression and breast cancer. Cell Mol Biomed Rep. 2021;1(1):7–13.
Curty G, Marston JL, de Mulder Rougvie M, Leal FE, Nixon DF, Soares MA. Human endogenous retrovirus K in cancer: a potential biomarker and immunotherapeutic target. Viruses. 2020;12(7):726. PubMed PMC
Xue B, Sechi LA, Kelvin DJ. Human endogenous retrovirus K (HML-2) in health and disease. Front Microbiol. 2020;11:1690. PubMed PMC
Vargiu L, Rodriguez-Tome P, Sperber GO, Cadeddu M, Grandi N, Blikstad V, et al. . Classification and characterization of human endogenous retroviruses; mosaic forms are common. Retrovirology. 2016;13:7. PubMed PMC
Kulski JK. Long noncoding RNA HCP5, a hybrid HLA class I endogenous retroviral gene: structure, expression, and disease associations. Cells. 2019;8(5):480. PubMed PMC
Wang LH, Luan T, Zhou SH, Lin J, Yang Y, Liu W, et al. . LncRNA HCP5 promotes triple negative breast cancer progression as a ceRNA to regulate BIRC3 by sponging miR-219a-5p. Cancer Med. 2019;8(9):4389–403. PubMed PMC
The Cancer Genome Atlas Program (TCGA). Available from: https://www.cancer.gov/tcga.
Goldman MJ, Craft B, Hastie M, Repecka K, McDade F, Kamath A, et al. . Visualizing and interpreting cancer genomics data via the Xena platform. Nat Biotechnol. 2020;38(6):675–8. PubMed PMC
Xena UCSC. Available From: https://xena.ucsc.edu/.
Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, De Paepe A, et al. . Accurate normalization of realtime quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol. 2002;3(7):RESEARCH0034. PubMed PMC
Hellemans J, Mortier G, De Paepe A, Speleman F, Vandesompele J. qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data. Genome Biol. 2007;8(2):R19. PubMed PMC
Wei YZ, Wei HL, Wei YF, Tan AH, Chen XY, Liao XQ, et al. . Screening and identification of human endogenous retrovirus-K mRNAs for breast cancer through integrative analysis of multiple datasets. Front Oncol. 2022;12:820883. PubMed PMC
Ko EJ, Song KS, Ock MS, Choi YH, Kim S, Kim HS, et al. . Expression profiles of human endogenous retrovirus (HERV)-K and HERV-R Env proteins in various cancers. BMB Rep. 2021;54(7):368–73. PubMed PMC
Kumar V, McClelland M, Nguyen J, De Robles G, Ittmann M, Castro P, et al. . Expression of endogenous retroviral RNA in prostate tumors has prognostic value and shows differences among Americans of african versus European/middle eastern ancestry. Cancers. 2021;13(24):6347. PubMed PMC
Roberts RM, Ezashi T, Schulz LC, Sugimoto J, Schust DJ, Khan T, et al. . Syncytins expressed in human placental trophoblast. Placenta. 2021;113:8–14. PubMed PMC
Wang QQ, Shi Y, Bian Q, Zhang NB, Wang M, Wang JN, et al. . Molecular mechanisms of syncytin-1 in tumors and placental development related diseases. Discov Oncol. 2023;14(1):104. PubMed PMC
Strissel PL, Ruebner M, Thiel F, Wachter D, Ekici AB, Wolf F, et al. . Reactivation of codogenic endogenous retroviral (ERV) envelope genes in human endometrial carcinoma and prestages: emergence of new molecular targets. Oncotarget. 2012;3(10):1204–19. PubMed PMC
Ficial M, Jegede OA, Sant’Angelo M, Hou Y, Flaifel A, Pignon JC, et al. . Expression of T-cell exhaustion molecules and human endogenous retroviruses as predictive biomarkers for response to nivolumab in metastatic clear cell renal cell carcinoma. Clin Cancer Res. 2021;27(5):1371–80. PubMed PMC
Gimenez J, Montgiraud C, Pichon JP, Bonnaud B, Arsac M, Ruel K, et al. . Custom human endogenous retroviruses dedicated microarray identifies self-induced HERV-W family elements reactivated in testicular cancer upon methylation control. Nucleic Acids Res. 2010;38(7):2229–46. PubMed PMC
Chen BS, Xu K, Zhang YM, Xu P, Li CM, Liu J, et al. . LncRNA ERVH48-1 contributes to the drug resistance of prostate cancer and proliferation through sponging of miR-4784 to the activation of the wnt/β-catenin pathway. Cancers. 2023;15(6):1902. PubMed PMC
Zhan X, Feng S, Zhou X, Liao W, Zhao B, Yang Q, et al. . Immunotherapy response and microenvironment provide biomarkers of immunotherapy options for patients with lung adenocarcinoma. Front Genet. 2022;13:1047435. PubMed PMC
Kasperek A, Beguin A, Bawa O, De Azevedo K, Job B, Massard C, et al. . Therapeutic potential of the human endogenous retroviral envelope protein HEMO: a pan-cancer analysis. Mol Oncol. 2022;16(7):1451–73. PubMed PMC
Li J, Gao CD, Liu C, Zhou C, Ma XR, Li HY, et al. . Four lncRNAs associated with breast cancer prognosis identified by coexpression network analysis. J Cell Physiol. 2019;234(8):14019–30. PubMed
Ghafouri-Fard S, Taherian-Esfahani Z, Dashti S, Kholghi Oskooei V, Taheri M, Samsami M. Gene expression of indoleamine and tryptophan dioxygenases and three long non-coding RNAs in breast cancer. Exp Mol Pathol. 2020;114:104415. PubMed
Wu JJ, Chen H, Ye MN, Wang B, Zhang YZ, Sheng JY, et al. . Long noncoding RNA HCP5 contributes to cisplatin resistance in human triple-negative breast cancer via regulation of PTEN expression. Biomed Pharmacother. 2019;115:108869. PubMed
Tong X, Yu ZL, Xing JN, Liu HZ, Zhou SH, Huang YE, et al. . LncRNA HCP5-encoded protein regulates ferroptosis to promote the progression of triple-negative breast cancer. Cancers. 2023;15(6):1880. PubMed PMC
Hu SP, Ge MX, Gao L, Jiang M, Hu KW. LncRNA HCP5 as a potential therapeutic target and prognostic biomarker for various cancers: a meta-analysis and bioinformatics analysis. Cancer Cell Int. 2021;21(1):686. PubMed PMC
Qin SY, Yang L, Kong S, Xu YH, Liang B, Ju SQ. LncRNA HCP5: a potential biomarker for diagnosing gastric cancer. Front Oncol. 2021;11:684531. PubMed PMC
Bai N, Ma Y, Zhao J, Li B. Knockdown of lncRNA HCP5 suppresses the progression of colorectal cancer by miR-299-3p/PFN1/AKT Axis. Cancer Manag Res. 2020;12:4747–58. PubMed PMC