N-glycans in lung tissue specimens: a prospective target for enhanced cancer diagnosis and prognosis
Status In-Process Jazyk angličtina Země Velká Británie, Anglie Médium electronic
Typ dokumentu časopisecké články
PubMed
40813986
PubMed Central
PMC12355761
DOI
10.1186/s12967-025-06904-6
PII: 10.1186/s12967-025-06904-6
Knihovny.cz E-zdroje
- Klíčová slova
- N-glycans, Branched glycans, Fucosylation, Glycosylation, Lung cancer, MALDI-MS,
- Publikační typ
- časopisecké články MeSH
BACKGROUND: It is well established that the cancerous transformation of cells is accompanied by profound alterations in glycosylation. In this study, we demonstrate the diagnostic potential of N-glycan profiling in tissue specimens from patients, primarily representing the two major types of lung cancer: non-small cell and small cell lung cancer. METHODS: Lung tissues and biopsies obtained from surgery and bronchoscopy underwent sample processing and enzymatic digestion. After labeling, glycans were analyzed employing matrix-assisted laser desorption/ionization mass spectrometry. Statistical analysis was conducted using methods following principles of compositional data analysis. RESULTS: Comparison of glycan profiles demonstrated an increase in paucimannose and high mannose glycans in most tumor specimens, including those with inflammation and histological negative for malignancy. Cancerous tissues exhibited more profound changes in glycosylation. Despite the high heterogeneity in profiles, two main groups of not detected glycans in peritumoral tissues, considered as controls, were observed to correlate with cancer progression in patients. One with complex polylactosamine multifucosylated glycans frequently harboring terminal N-acetyl-glucosamine residues. These glycans were present in most tumors, with their numbers and intensities increasing as cancer progressed. In contrast, the second group exhibited polylactosamine glycans sporadically. Instead, the biopsies of several patients with rapid progression displayed a significant presence in a set of tri- and tetra-antennary core fucosylated glycans having mostly unoccupied N-acetyl-glucosamine residues unless carrying additional fucose unit(s). CONCLUSIONS: The results imply distinct glycosylation patterns even in patients with the same histological type of lung cancer, supporting trends toward personalized diagnosis and more tailored therapies. Currently, tissue biopsies remain the gold standard for diagnosing premalignant and malignant lesions in the lung. Expanded knowledge on glycosylation in these lesions could contribute to improved diagnostic accuracy and better monitoring of malignant disease progression in clinical practice.
Central European Institute for Technology Masaryk University 625 00 Brno Czech Republic
The Institute of Human Virology University of Maryland 725 W Lombard St Baltimore MD 21201 USA
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Sung H, Ferlay J, Siegel RL, Laversanne M, Soerjomataram I, Jemal A, et al. Global cancer statistics 2020: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries. Cancer J Clin. 2021;71:209–49. PubMed
Thai AA, Solomon BJ, Sequist LV, Gainor JF, Heist RS. Lung cancer. The Lancet. 2021;398:535–54. PubMed
Clancy L. Reducing lung cancer and other tobacco-related cancers in europe: smoking cessation is the key. Oncologist. 2014;19:16–20. PubMed PMC
Kirby T. Young non-smoker diagnosed with lung cancer. Lancet Respir Med. 2020;8:141–2. PubMed
Pelosof L, Ahn C, Gao A, Horn L, Madrigales A, Cox J, et al. Proportion of Never-Smoker Non–Small Cell Lung Cancer Patients at Three Diverse Institutions. JNCI: Journal of the National Cancer Institute. 2017;109:djw295. PubMed PMC
Travis WD, Brambilla E, Riely GJ. New pathologic classification of lung cancer: relevance for clinical practice and clinical trials. JCO. 2013;31:992–1001. PubMed
Rami-Porta R, Bolejack V, Giroux DJ, Chansky K, Crowley J, Asamura H, et al. The IASLC Lung cancer staging project: the new database to inform the eighth edition of the TNM classification of lung cancer. J Thoracic Oncol. 2014;9:1618–24. PubMed
Zheng M. Classification and pathology of lung cancer. Surg Oncol Clin N Am. 2016;25:447–68. PubMed
Boland JM. Unusual lung tumors—from morphology to genetics. Mod Pathol. 2022;35:57–65. PubMed
Tang M, Abbas HA, Negrao MV, Ramineni M, Hu X, Hubert SM, et al. The histologic phenotype of lung cancers is associated with transcriptomic features rather than genomic characteristics. Nat Commun. 2021;12:7081. PubMed PMC
Skrickova J, Pesek M, Opalka P, Koubkova L, Zemanova M, Hrnciarik M, et al. Prognostic value of EGFR Exon-20 insertions in czech patients with advanced non-small cell lung cancer. Anticancer Res. 2021;41:5625–34. PubMed
Cibulskis K, Lawrence MS, Carter SL, Sivachenko A, Jaffe D, Sougnez C, et al. Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples. Nat Biotechnol. 2013;31:213–9. PubMed PMC
Balani S, Nguyen LV, Eaves CJ. Modeling the process of human tumorigenesis. Nat Commun. 2017;8:15422. PubMed PMC
Network TCGAR. Comprehensive molecular profiling of lung adenocarcinoma. Nature. 2014; 511: 543–50. PubMed PMC
Planck M, Edlund K, Botling J, Micke P, Isaksson S, Staaf J. Genomic and transcriptional alterations in lung adenocarcinoma in relation to EGFR and KRAS mutation status. PLoS ONE. 2013;8: e78614. PubMed PMC
Lester DK, Burton C, Gardner A, Innamarato P, Kodumudi K, Liu Q, et al. Fucosylation of HLA-DRB1 regulates CD4+ T cell-mediated anti-melanoma immunity and enhances immunotherapy efficacy. Nat Cancer. 2023;4:222–39. PubMed PMC
Paez JG, Jänne PA, Lee JC, Tracy S, Greulich H, Gabriel S, et al. EGFR mutations in lung cancer: correlation with clinical response to gefitinib therapy. Science. 2004;304:1497–500. PubMed
Kwak EL, Bang Y-J, Camidge DR, Shaw AT, Solomon B, Maki RG, et al. Anaplastic lymphoma kinase inhibition in non–small-cell lung cancer. N Engl J Med. 2010;363:1693–703. PubMed PMC
Drilon A, Wang L, Hasanovic A, Suehara Y, Lipson D, Stephens P, et al. Response to Cabozantinib in patients with RET fusion-positive lung adenocarcinomas. Cancer Discov. 2013;3:630–5. PubMed PMC
Cummings RD, Pierce JM. The challenge and promise of glycomics. Chem Biol. 2014;21:1–15. PubMed PMC
Ohtsubo K, Marth JD. Glycosylation in cellular mechanisms of health and disease. Cell. 2006;126:855–67. PubMed
Hacker K, White L, de Silva AM. N-linked glycans on dengue viruses grown in mammalian and insect cells. J Gen Virol. 2009;90:2097–106. PubMed PMC
Taniguchi N, Kizuka Y. Chapter Two - Glycans and Cancer: Role of N-Glycans in Cancer Biomarker, Progression and Metastasis, and Therapeutics. In: Drake RR, Ball LE, editors. Advances in Cancer Research. 2015; p.11–51. PubMed
Esposito M, Mondal N, Greco TM, Wei Y, Spadazzi C, Lin S-C, et al. Bone vascular niche E-selectin induces mesenchymal–epithelial transition and Wnt activation in cancer cells to promote bone metastasis. Nat Cell Biol. 2019;21:627–39. PubMed PMC
Lombard J. The multiple evolutionary origins of the eukaryotic N-glycosylation pathway. Biol Direct. 2016;11:36. PubMed PMC
Yale AR, Nourse JL, Lee KR, Ahmed SN, Arulmoli J, Jiang AYL, et al. Cell surface N-glycans influence electrophysiological properties and fate potential of neural stem cells. Stem Cell Reports. 2018;11:869–82. PubMed PMC
Gagneux P, Panin V, Hennet T, Aebi M, Varki A. Evolution of Glycan Diversity. In: Varki A, Cummings RD, Esko JD, Stanley P, Hart GW, Aebi M, et al., editors. Essentials of Glycobiology. 4th ed. Cold Spring Harbor (NY): Cold Spring Harbor Laboratory Press; 2022. PubMed
Jia N, Barclay WS, Roberts K, Yen H-L, Chan RWY, Lam AKY, et al. Glycomic characterization of respiratory tract tissues of ferrets: implications for its use in influenza virus infection studies *. J Biol Chem. 2014;289:28489–504. PubMed PMC
Kurimoto A, Kitazume S, Kizuka Y, Nakajima K, Oka R, Fujinawa R, et al. The absence of core fucose up-regulates GnT-III and Wnt target genes. J Biol Chem. 2014;289:11704–14. PubMed PMC
Walther T, Karamanska R, Chan RWY, Chan MCW, Jia N, Air G, et al. 2013. Glycomic Analysis of Human Respiratory Tract Tissues and Correlation with Influenza Virus Infection. Pekosz A, editor. PLoS Pathogens. 9: e1003223. PubMed PMC
Hare NJ, Lee LY, Loke I, Britton WJ, Saunders BM, Thaysen-Andersen M. Mycobacterium tuberculosis Infection manipulates the glycosylation machinery and the N-glycoproteome of human macrophages and their microparticles. J Proteome Res. 2017;16:247–63. PubMed
Malaker SA, Quanico J, Raffo-Romero A, Kobeissy F, Aboulouard S, Tierny D, et al. On-tissue spatially resolved glycoproteomics guided by N-glycan imaging reveal global dysregulation of canine glioma glycoproteomic landscape. Cell Chem Biol. 2022;29:30-42.e4. PubMed PMC
McDowell CT, Lu X, Mehta AS, Angel PM, Drake RR. Applications and continued evolution of glycan imaging mass spectrometry. Mass Spectrom Rev. 2023;42:674–705. PubMed PMC
Lattová E, Tomanek B, Bartusik D, Perreault H. N-glycomic changes in human breast carcinoma MCF-7 and T-lymphoblastoid cells after treatment with herceptin and herceptin/lipoplex. J Proteome Res. 2010;9:1533–40. PubMed
Balog CIA, Stavenhagen K, Fung WLJ, Koeleman CA, McDonnell LA, Verhoeven A, et al. N-glycosylation of colorectal cancer tissues. Mol Cell Proteomics. 2012;11:571–85. PubMed PMC
Ruhaak LR, Taylor SL, Stroble C, Nguyen UT, Parker EA, Song T, et al. Differential N-glycosylation patterns in lung adenocarcinoma tissue. J Proteome Res. 2015;14:4538–49. PubMed PMC
Conroy LR, Stanback AE, Young LEA, Clarke HA, Austin GL, Liu J, et al. In situ analysis of N-linked glycans as potential biomarkers of clinical course in human prostate cancer. Mol Cancer Res. 2021;19:1727–38. PubMed PMC
Sanda M, Ahn J, Kozlik P, Goldman R. Analysis of site and structure specific core fucosylation in liver cirrhosis using exoglycosidase-assisted data-independent LC-MS/MS. Sci Rep. 2021;11:23273. PubMed PMC
Jezková P, Skřičková J, Wimmer GJ, Zelinková J, Zdráhal Z, Lattová E. Differentiation of sialyl linkages using a combination of alkyl esterification and phenylhydrazine derivatization: application for n-glycan profiling in the sera of patients with lung cancer. Anal Chem. 2022;94:6736–44. PubMed
Alvarez MRS, Zhou Q, Tena J, Lebrilla CB, Completo GC, Heralde FM, et al. N-glycan and glycopeptide serum biomarkers in philippine lung cancer patients identified using liquid chromatography-tandem mass spectrometry. ACS Omega. 2022;7:40230–40. PubMed PMC
Kondo K, Harada Y, Nakano M, Suzuki T, Fukushige T, Hanzawa K, et al. Identification of distinct N-glycosylation patterns on extracellular vesicles from small-cell and non–small-cell lung cancer cells. J Biol Chem. 2022;298:1. PubMed PMC
Mukhopadhyay S, Katzenstein A-LA. Subclassification of non-small cell lung carcinomas lacking morphologic differentiation on biopsy specimens: utility of an immunohistochemical panel containing TTF-1, napsin A, p63, and CK5/6. Am J Surg Pathol. 2011;35:15. PubMed
Lattová E, Skřičková J, Hausnerová J, Frola L, Křen L, Ihnatová I, et al. N-Glycan profiling of lung adenocarcinoma in patients at different stages of disease. Mod Pathol. 2020;33:1146–56. PubMed
Satomaa T, Heiskanen A, Leonardsson I, Angström J, Olonen A, Blomqvist M, et al. Analysis of the human cancer glycome identifies a novel group of tumor-associated N-acetylglucosamine glycan antigens. Cancer Res. 2009;69:5811–9. PubMed
Wang X, Deng Z, Huang C, Zhu T, Lou J, Wang L, et al. Differential N-glycan patterns identified in lung adenocarcinoma by N-glycan profiling of formalin-fixed paraffin-embedded (FFPE) tissue sections. J Proteomics. 2018;172:1–10. PubMed
Lattová E, Bryant J, Skřičková J, Zdráhal Z, Popovič M. Efficient procedure for N-glycan analyses and detection of endo H-like activity in human tumor specimens. J Proteome Res. 2016;15:2777–86. PubMed
Lattová E, Skřičková J, Zdráhal Z. Applicability of phenylhydrazine labeling for structural studies of fucosylated N-glycans. Anal Chem. 2019;91:7985–90. PubMed
Bennett AR, Lundstrøm J, Chatterjee S, Thaysen-Andersen M, Bojar D. Compositional data analysis enables statistical rigor in comparative glycomics. Nat Commun. 2025;16:795. PubMed PMC
Stekhoven DJ, Bühlmann P. MissForest—non-parametric missing value imputation for mixed-type data. Bioinformatics. 2012;28:112–8. PubMed
Dahmen A-C, Fergen M-T, Laurini C, Schmitz B, Loke I, Thaysen-Andersen M, et al. Paucimannosidic glycoepitopes are functionally involved in proliferation of neural progenitor cells in the subventricular zone. Glycobiology. 2015;25:869–80. PubMed
Chatterjee S, Lee LY, Kawahara R, Abrahams JL, Adamczyk B, Anugraham M, et al. Protein paucimannosylation is an enriched N-glycosylation signature of human cancers. Proteomics. 2019;19:1900010. PubMed
Benesova I, Nenutil R, Urminsky A, Lattova E, Uhrik L, Grell P, et al. N-glycan profiling of tissue samples to aid breast cancer subtyping. Sci Rep. 2024;14:320. PubMed PMC
Venkatakrishnan V, Thomsson KA, Padra M, Andersson A, Brundin B, Christenson K, et al. Protein N-glycosylation in the bronchoalveolar space differs between never-smokers and long-term smokers with and without COPD. Glycobiology. 2023;33:1128–38. PubMed PMC
Tu H-C, Hsiao Y-C, Yang W-Y, Tsai S-L, Lin H-K, Liao C-Y, et al. Up-regulation of golgi α-mannosidase IA and down-regulation of golgi α-mannosidase IC activates unfolded protein response during hepatocarcinogenesis. Hepatol Commun. 2017;1:230–47. PubMed PMC
Xiang Y, Karaveg K, Moremen KW. Substrate recognition and catalysis by GH47 α-mannosidases involved in Asn-linked glycan maturation in the mammalian secretory pathway. Proc Natl Acad Sci. 2016;113:E7890–9. PubMed PMC
Xie A, Wang J, Liu Y, Li G, Yang N. Impacts of β-1, 3-N-acetylglucosaminyltransferases (B3GNTs) in human diseases. Mol Biol Rep. 2024;51:476. PubMed
Taniguchi N, Ohkawa Y, Maeda K, Harada Y, Nagae M, Kizuka Y, et al. True significance of N-acetylglucosaminyltransferases GnT-III, V and α1,6 fucosyltransferase in epithelial-mesenchymal transition and cancer. Mol Aspects Med. 2021;79: 100905. PubMed
Jia L, Zhang J, Ma T, Guo Y, Yu Y, Cui J. The function of fucosylation in progression of lung cancer. Front Oncol. 2018;8:1. PubMed PMC
Alvarez CA, Qian E, Glendenning LM, Reynero KM, Kukan EN, Cobb BA. Acute and chronic lung inflammation drives changes in epithelial glycans. Front Immunol. 2023;14:1167908. PubMed PMC
Lin L, Chen X, Lin G, Chen L, Xu Y, Zeng Y. FUT3 facilitates glucose metabolism of lung adenocarcinoma via activation of NF-κB pathway. BMC Pulm Med. 2023;23:436. PubMed PMC
Nie H, Saini P, Miyamoto T, Liao L, Zielinski RJ, Liu H, et al. Targeting branched N-glycans and fucosylation sensitizes ovarian tumors to immune checkpoint blockade. Nat Commun. 2024;15:2853. PubMed PMC
Li Y, Lin Y, Aye L, Dong L, Zhang C, Chen F, et al. An integrative pan-cancer analysis of the molecular and biological features of glycosyltransferases. Clin Transl Med. 2022;12: e872. PubMed PMC
Ashkani J, Naidoo KJ. Glycosyltransferase gene expression profiles classify cancer types and propose prognostic subtypes. Sci Rep. 2016;6:26451. PubMed PMC
Liang J, Chen Q, Gao W, Chen D, Qian X, Bi J, et al. A novel glycosylation-related gene signature predicts survival in patients with lung adenocarcinoma. BMC Bioinf. 2022;23:562. PubMed PMC
Zhou J, Zhang K, Yang T, Li A, Li M, Peng X, et al. Identification and validation of a glycosyltransferase gene signature as a novel prognostic model for lung adenocarcinoma. Heliyon. 2024;10: e29383. PubMed PMC