Characterization of a phosphoinositide-binding protein containing a PHOX homology domain in the malaria parasite Plasmodium falciparum
Jazyk angličtina Země Anglie, Velká Británie Médium electronic
Typ dokumentu časopisecké články
Grantová podpora
R01 GM129325
NIGMS NIH HHS - United States
VEGA 2/0047/23
Slovak Academy of Sciences
RES0043758, and RES0046091
Natural Sciences and Engineering Research Council of Canada
406675
CIHR - Canada
PubMed
41125830
PubMed Central
PMC12546714
DOI
10.1038/s41598-025-20974-y
PII: 10.1038/s41598-025-20974-y
Knihovny.cz E-zdroje
- Klíčová slova
- Golgi, Malaria, PX domain, Phosphoinositides, Protein trafficking,
- MeSH
- fosfatidylinositoly * metabolismus MeSH
- Golgiho aparát metabolismus MeSH
- lidé MeSH
- Plasmodium falciparum * metabolismus genetika MeSH
- proteinové domény MeSH
- protozoální proteiny * metabolismus chemie genetika MeSH
- sekvence aminokyselin MeSH
- tropická malárie parazitologie MeSH
- vazba proteinů MeSH
- vazebná místa MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- Názvy látek
- fosfatidylinositoly * MeSH
- protozoální proteiny * MeSH
Phosphoinositides (PIPs), are key regulators of membrane identity and vesicular trafficking. By dynamically shaping the lipid composition of intracellular membranes, PIPs help ensure the specificity of cargo delivery. In apicomplexan parasites such as Plasmodium falciparum, the biogenesis of the specialized secretory organelles involved in erythrocyte invasion (named rhoptries, micronemes, and dense granules), remains poorly understood, particularly regarding how proteins are sorted and specifically targeted to their respective destinations. Our hypothesis is that PIPs might play a role in this process. We here present our characterization of the P. falciparum protein Pf3D7_0704400, a putative PIP-binding protein containing a PX domain. We named this protein PfPX2, following the previously characterized PX domain-containing protein PfPX1. In silico structural analysis revealed that the PfPX2 PX domain contains both canonical and non-canonical PIP-binding motifs and a positively charged binding pocket. Lipid binding assays showed that the PfPX2 PX domain can bind all species of PIPs with a preference for PI3P, PI5P and PI(3,5)P2. Immunofluorescence assays demonstrated that PfPX2 localized to the Golgi apparatus and the micronemes in developing schizonts. Moreover, proximity labelling enabled the identification of protein such as PfSortilin, the clathrin heavy chain and PfDyn1 as potential interactors of PfPX2. Globally, these data suggest that PfPX2 is a PIP-binding protein potentially implicated in vesicular trafficking between the Golgi apparatus and the micronemes. Our bioinformatics analyses identified PX2 orthologues across apicomplexans and indeed other alveolates, raising the possibility that this protein plays a role in a broad range of medically, agriculturally, and environmentally relevant organisms.
Centre de Recherche en Infectiologie de L'Université Laval Quebec City QC Canada
CHU de Québec Université Laval Research Centre 2705 Boul Laurier Québec QC G1V 4G2 Canada
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Corvera, S., D’Arrigo, A. & Stenmark, H. Phosphoinositides in membrane traffic. PubMed
Di Paolo, G. & De Camilli, P. Phosphoinositides in cell regulation and membrane dynamics. PubMed
Balla, T. Phosphoinositides: Tiny lipids with giant impact on cell regulation. PubMed PMC
Nasuhoglu, C. et al. Nonradioactive analysis of phosphatidylinositides and other anionic phospholipids by anion-exchange high-performance liquid chromatography with suppressed conductivity detection. PubMed
Wengelnik, K., Daher, W. & Lebrun, M. Phosphoinositides and their functions in apicomplexan parasites. PubMed
Ebrahimzadeh, Z., Mukherjee, A. & Richard, D. A map of the subcellular distribution of phosphoinositides in the erythrocytic cycle of the malaria parasite Plasmodium falciparum. PubMed
Chandra, M. et al. Classification of the human phox homology (PX) domains based on their phosphoinositide binding specificities. PubMed PMC
Tawk, L. et al. Phosphatidylinositol 3-phosphate, an essential lipid in Plasmodium, localizes to the food vacuole membrane and the apicoplast. PubMed PMC
Vaid, A., Ranjan, R., Smythe, W. A., Hoppe, H. C. & Sharma, P. PfPI3K, a phosphatidylinositol-3 kinase from Plasmodium falciparum, is exported to the host erythrocyte and is involved in hemoglobin trafficking. PubMed PMC
Jakob Birnbaum, S. S. et al. A Kelch13-defined endocytosis pathway mediates artemisinin resistance in malaria parasites. PubMed
Mukherjee, A. et al. A Phosphoinositide-binding protein acts in the trafficking pathway of hemoglobin in the malaria parasite Plasmodium falciparum. PubMed PMC
Jonscher, E. et al. PfVPS45 is required for host cell cytosol uptake by malaria blood stage parasites. PubMed
WHO. World malaria report 2024: Addressing inequity in the global malaria response. (2024).
Bjorkman, A., Benn, C. S., Aaby, P. & Schapira, A. RTS,S/AS01 malaria vaccine-proven safe and effective?. PubMed
Menard, D. & Fidock, D. A. Accelerated evolution and spread of multidrug-resistant Plasmodium falciparum takes down the latest first-line antimalarial drug in southeast Asia. PubMed PMC
Liffner, B. et al. Atlas of Plasmodium falciparum intraerythrocytic development using expansion microscopy. PubMed PMC
Bannister, L. H., Hopkins, J. M., Fowler, R. E., Krishna, S. & Mitchell, G. H. Ultrastructure of rhoptry development in Plasmodium falciparum erythrocytic schizonts. PubMed
Rudlaff, R. M., Kraemer, S., Marshman, J. & Dvorin, J. D. Three-dimensional ultrastructure of Plasmodium falciparum throughout cytokinesis. PubMed PMC
Healer, J., Crawford, S., Ralph, S., McFadden, G. & Cowman, A. F. Independent translocation of two micronemal proteins in developing Plasmodium falciparum merozoites. PubMed PMC
Hallee, S., Boddey, J. A., Cowman, A. F. & Richard, D. Evidence that the Plasmodium falciparum protein sortilin potentially acts as an escorter for the trafficking of the rhoptry-associated membrane antigen to the rhoptries. PubMed PMC
Hallee, S., Counihan, N. A., Matthews, K., de Koning-Ward, T. F. & Richard, D. The malaria parasite Plasmodium falciparum sortilin is essential for merozoite formation and apical complex biogenesis. PubMed
Abramson, J. et al. Accurate structure prediction of biomolecular interactions with AlphaFold 3. PubMed PMC
Pettersen, E. F. et al. UCSF chimeraX: Structure visualization for researchers, educators, and developers. PubMed PMC
Chahar, P. et al. Genome-wide collation of the Plasmodium falciparum WDR protein superfamily reveals malarial parasite-specific features. PubMed PMC
Jain, B. P. & Pandey, S. WD40 repeat proteins: Signalling scaffold with diverse functions. PubMed
Teasdale, R. D. & Collins, B. M. Insights into the PX (phox-homology) domain and SNX (sorting nexin) protein families: Structures, functions and roles in disease. PubMed
Bravo, J. et al. The Crystal Structure of the PX Domain from p40phox bound to phosphatidylinositol 3-phosphate. PubMed
Cheng, G. & Lambeth, J. D. NOXO1, regulation of lipid binding, localization, and activation of Nox1 by the Phox homology (PX) domain. PubMed
Birnbaum, J. et al. A genetic system to study Plasmodium falciparum protein function. PubMed
Salmon, B. L., Oksman, A. & Goldberg, D. E. Malaria parasite exit from the host erythrocyte: A two-step process requiring extraerythrocytic proteolysis. PubMed PMC
Absalon, S., Robbins, J. A. & Dvorin, J. D. An essential malaria protein defines the architecture of blood-stage and transmission-stage parasites. PubMed PMC
Ebrahimzadeh, Z. et al. A pan-apicomplexan phosphoinositide-binding protein acts in malarial microneme exocytosis. PubMed PMC
Roucheray, S., Narciso, M. R. & Richard, D. Characterization of the malaria parasite. PubMed PMC
Kimmel, J. et al. Gene-by-gene screen of the unknown proteins encoded on Plasmodium falciparum chromosome 3. PubMed
Mukherjee, A. et al. A phosphoinositide-binding protein acts in the trafficking pathway of hemoglobin in the malaria parasite Plasmodium falciparum. PubMed PMC
Zhang, M. et al. Uncovering the essential genes of the human malaria parasite Plasmodium falciparum by saturation mutagenesis. PubMed PMC
Elsworth, B. et al. The essential genome of. PubMed PMC
Prommana, P. et al. Inducible knockdown of Plasmodium gene expression using the glms ribozyme. PubMed PMC
Goldfless, S. J., Wagner, J. C. & Niles, J. C. Versatile control of Plasmodium falciparum gene expression with an inducible protein–RNA interaction. PubMed PMC
Ouyang, S., Jia, B., Xie, W., Yang, J. & Lv, Y. Mechanism underlying the regulation of sortilin expression and its trafficking function. PubMed
Sloves, P. J. et al. Toxoplasma sortilin-like receptor regulates protein transport and is essential for apical secretory organelle biogenesis and host infection. PubMed
Henrici, R. C. et al. The Plasmodium falciparum artemisinin susceptibility-associated AP-2 adaptin mu subunit is clathrin independent and essential for schizont maturation. PubMed PMC
Dell’Angelica, E. C. Clathrin-binding proteins: Got a motif? Join the network!. PubMed
Brodsky, F. M. Diversity of clathrin function: New tricks for an old protein. PubMed
Pieperhoff, M. S., Schmitt, M., Ferguson, D. J. & Meissner, M. The role of clathrin in post-Golgi trafficking in toxoplasma gondii. PubMed PMC
Miao, J. & Cui, L. (bioRxiv, 2024).
Krai, P., Dalal, S. & Klemba, M. Evidence for a Golgi-to-endosome protein sorting pathway in Plasmodium falciparum. PubMed PMC
Sabitzki, R. et al. Role of Rabenosyn-5 and Rab5b in host cell cytosol uptake reveals conservation of endosomal transport in malaria parasites. PubMed PMC
Sever, S., Chang, J. & Gu, C. Dynamin rings: Not just for fission. PubMed PMC
Breinich, M. S. et al. A dynamin is required for the biogenesis of secretory organelles in toxoplasma gondii. PubMed PMC
McGovern, O. L., Rivera-Cuevas, Y., Kannan, G., Narwold, A. J. Jr. & Carruthers, V. B. Intersection of endocytic and exocytic systems in toxoplasma gondii. PubMed PMC
Zhou, H. C., Gao, Y., Zhong, X. & Wang, H. Dynamin like protein 1 participated in the hemoglobin uptake pathway of Plasmodium falciparum. PubMed
Li, H. et al. Isolation and functional characterization of a dynamin-like gene from Plasmodium falciparum. PubMed
Eisenberg-Bord, M., Shai, N., Schuldiner, M. & Bohnert, M. A tether is a tether is a tether: Tethering at membrane contact sites. PubMed
Henne, W. M. et al. Mdm1/Snx13 is a novel ER-endolysosomal interorganelle tethering protein. PubMed PMC
Daher, W. et al. Lipid kinases are essential for apicoplast homeostasis in toxoplasma gondii. PubMed PMC
Milani, K. J., Schneider, T. G. & Taraschi, T. F. Defining the morphology and mechanism of the hemoglobin transport pathway in Plasmodium falciparum-infected erythrocytes. PubMed PMC
Trager, W. & Jensen, J. B. Human malaria parasites in continuous culture. PubMed
Elmendorf, H. G. & Haldar, K. Identification and localization of ERD2 in the malaria parasite Plasmodium falciparum: separation from sites of sphingomyelin synthesis and implications for organization of the Golgi. PubMed PMC
Schofield, L. et al. A rhoptry antigen of Plasmodium falciparum contains conserved and variable epitopes recognized by inhibitory monoclonal antibodies. PubMed
Coley, A. M. et al. Rapid and precise epitope mapping of monoclonal antibodies against Plasmodium falciparum AMA1 by combined phage display of fragments and random peptides. PubMed
Barlow, L. D.
Blum, M. et al. InterPro: The protein sequence classification resource in 2025. PubMed PMC
Katoh, K. & Standley, D. M. MAFFT multiple sequence alignment software version 7: Improvements in performance and usability. PubMed PMC
Jones, P. et al. InterProScan 5: Genome-scale protein function classification. PubMed PMC