-
Je něco špatně v tomto záznamu ?
jSIPRO - analysis tool for magnetic resonance spectroscopic imaging
F. Jiru, A. Skoch, D. Wagnerova, M. Dezortova, M. Hajek,
Jazyk angličtina Země Irsko
Typ dokumentu časopisecké články, práce podpořená grantem
Grantová podpora
NT13017
MZ0
CEP - Centrální evidence projektů
- MeSH
- automatizované zpracování dat statistika a číselné údaje MeSH
- Fourierova analýza MeSH
- funkční zobrazování neurálních procesů statistika a číselné údaje MeSH
- lidé MeSH
- magnetická rezonanční tomografie statistika a číselné údaje MeSH
- mozek metabolismus patologie MeSH
- programovací jazyk MeSH
- software * MeSH
- zobrazování trojrozměrné MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
Magnetic resonance spectroscopic imaging (MRSI) involves a huge number of spectra to be processed and analyzed. Several tools enabling MRSI data processing have been developed and widely used. However, the processing programs primarily focus on sophisticated spectra processing and offer limited support for the analysis of the calculated spectroscopic maps. In this paper the jSIPRO (java Spectroscopic Imaging PROcessing) program is presented, which is a java-based graphical interface enabling post-processing, viewing, analysis and result reporting of MRSI data. Interactive graphical processing as well as protocol controlled batch processing are available in jSIPRO. jSIPRO does not contain a built-in fitting program. Instead, it makes use of fitting programs from third parties and manages the data flows. Currently, automatic spectra processing using LCModel, TARQUIN and jMRUI programs are supported. Concentration and error values, fitted spectra, metabolite images and various parametric maps can be viewed for each calculated dataset. Metabolite images can be exported in the DICOM format either for archiving purposes or for the use in neurosurgery navigation systems.
Citace poskytuje Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc14064095
- 003
- CZ-PrNML
- 005
- 20191127103541.0
- 007
- ta
- 008
- 140704s2013 ie f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1016/j.cmpb.2013.06.018 $2 doi
- 035 __
- $a (PubMed)23870172
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a ie
- 100 1_
- $a Jírů, Filip, $u MR-Unit, Department of Diagnostic and Interventional Radiology, Institute for Clinical and Experimental Medicine, Videnska 1958/9, 14021 Prague 4, Czech Republic. Electronic address: fiji@medicon.cz. $d 1976- $7 xx0074154
- 245 10
- $a jSIPRO - analysis tool for magnetic resonance spectroscopic imaging / $c F. Jiru, A. Skoch, D. Wagnerova, M. Dezortova, M. Hajek,
- 520 9_
- $a Magnetic resonance spectroscopic imaging (MRSI) involves a huge number of spectra to be processed and analyzed. Several tools enabling MRSI data processing have been developed and widely used. However, the processing programs primarily focus on sophisticated spectra processing and offer limited support for the analysis of the calculated spectroscopic maps. In this paper the jSIPRO (java Spectroscopic Imaging PROcessing) program is presented, which is a java-based graphical interface enabling post-processing, viewing, analysis and result reporting of MRSI data. Interactive graphical processing as well as protocol controlled batch processing are available in jSIPRO. jSIPRO does not contain a built-in fitting program. Instead, it makes use of fitting programs from third parties and manages the data flows. Currently, automatic spectra processing using LCModel, TARQUIN and jMRUI programs are supported. Concentration and error values, fitted spectra, metabolite images and various parametric maps can be viewed for each calculated dataset. Metabolite images can be exported in the DICOM format either for archiving purposes or for the use in neurosurgery navigation systems.
- 650 _2
- $a automatizované zpracování dat $x statistika a číselné údaje $7 D001330
- 650 _2
- $a mozek $x metabolismus $x patologie $7 D001921
- 650 _2
- $a Fourierova analýza $7 D005583
- 650 _2
- $a funkční zobrazování neurálních procesů $x statistika a číselné údaje $7 D059907
- 650 _2
- $a lidé $7 D006801
- 650 _2
- $a zobrazování trojrozměrné $7 D021621
- 650 _2
- $a magnetická rezonanční tomografie $x statistika a číselné údaje $7 D008279
- 650 _2
- $a programovací jazyk $7 D011381
- 650 12
- $a software $7 D012984
- 655 _2
- $a časopisecké články $7 D016428
- 655 _2
- $a práce podpořená grantem $7 D013485
- 700 1_
- $a Škoch, Antonín, $d 1976- $7 xx0071615
- 700 1_
- $a Pajuelo, Dita $7 xx0220344
- 700 1_
- $a Dezortová, Monika, $d 1970- $7 xx0061339
- 700 1_
- $a Hájek, Milan, $d 1947- $7 xx0074172
- 773 0_
- $w MED00001214 $t Computer methods and programs in biomedicine $x 1872-7565 $g Roč. 112, č. 1 (2013), s. 173-188
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/23870172 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y a $z 0
- 990 __
- $a 20140704 $b ABA008
- 991 __
- $a 20191127103827 $b ABA008
- 999 __
- $a ok $b bmc $g 1031579 $s 862827
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2013 $b 112 $c 1 $d 173-188 $i 1872-7565 $m Computer methods and programs in biomedicine $n Comput Methods Programs Biomed $x MED00001214
- GRA __
- $a NT13017 $p MZ0
- LZP __
- $a Pubmed-20140704
