Detail
Article
Online article
FT
Medvik - BMC
  • Something wrong with this record ?

Ecology and Distribution of Thaumarchaea in the Deep Hypolimnion of Lake Maggiore

M. Coci, N. Odermatt, MM. Salcher, J. Pernthaler, G. Corno,

. 2015 ; 2015 (-) : 590434. [pub] 20150825

Language English Country United States

Document type Journal Article, Research Support, Non-U.S. Gov't

Ammonia-oxidizing Archaea (AOA) play an important role in the oxidation of ammonia in terrestrial, marine, and geothermal habitats, as confirmed by a number of studies specifically focused on those environments. Much less is known about the ecological role of AOA in freshwaters. In order to reach a high resolution at the Thaumarchaea community level, the probe MGI-535 was specifically designed for this study and applied to fluorescence in situ hybridization and catalyzed reporter deposition (CARD-FISH) analysis. We then applied it to a fine analysis of diversity and relative abundance of AOA in the deepest layers of the oligotrophic Lake Maggiore, confirming previous published results of AOA presence, but showing differences in abundance and distribution within the water column without significant seasonal trends with respect to Bacteria. Furthermore, phylogenetic analysis of AOA clone libraries from deep lake water and from a lake tributary, River Maggia, suggested the riverine origin of AOA of the deep hypolimnion of the lake.

References provided by Crossref.org

000      
00000naa a2200000 a 4500
001      
bmc16000030
003      
CZ-PrNML
005      
20160516100525.0
007      
ta
008      
160108s2015 xxu f 000 0|eng||
009      
AR
024    7_
$a 10.1155/2015/590434 $2 doi
035    __
$a (PubMed)26379473
040    __
$a ABA008 $b cze $d ABA008 $e AACR2
041    0_
$a eng
044    __
$a xxu
100    1_
$a Coci, Manuela $u Microbial Ecology Group, CNR-Institute of Ecosystem Study, Largo Tonolli 50, 28922 Verbania, Italy ; Microb&Co, Association for Microbial Ecology, Viale XX Settembre 45, 95128 Catania, Italy.
245    10
$a Ecology and Distribution of Thaumarchaea in the Deep Hypolimnion of Lake Maggiore / $c M. Coci, N. Odermatt, MM. Salcher, J. Pernthaler, G. Corno,
520    9_
$a Ammonia-oxidizing Archaea (AOA) play an important role in the oxidation of ammonia in terrestrial, marine, and geothermal habitats, as confirmed by a number of studies specifically focused on those environments. Much less is known about the ecological role of AOA in freshwaters. In order to reach a high resolution at the Thaumarchaea community level, the probe MGI-535 was specifically designed for this study and applied to fluorescence in situ hybridization and catalyzed reporter deposition (CARD-FISH) analysis. We then applied it to a fine analysis of diversity and relative abundance of AOA in the deepest layers of the oligotrophic Lake Maggiore, confirming previous published results of AOA presence, but showing differences in abundance and distribution within the water column without significant seasonal trends with respect to Bacteria. Furthermore, phylogenetic analysis of AOA clone libraries from deep lake water and from a lake tributary, River Maggia, suggested the riverine origin of AOA of the deep hypolimnion of the lake.
650    _2
$a amoniak $x metabolismus $7 D000641
650    _2
$a Archaea $x klasifikace $x genetika $x metabolismus $7 D001105
650    12
$a biodiverzita $7 D044822
650    _2
$a DNA archebakterií $x chemie $x genetika $7 D019641
650    _2
$a geologické sedimenty $x mikrobiologie $7 D019015
650    _2
$a hybridizace in situ fluorescenční $7 D017404
650    _2
$a jezera $x mikrobiologie $7 D060106
650    _2
$a molekulární sekvence - údaje $7 D008969
650    _2
$a oxidace-redukce $7 D010084
650    _2
$a fylogeneze $7 D010802
650    _2
$a sekvenční analýza DNA $7 D017422
655    _2
$a časopisecké články $7 D016428
655    _2
$a práce podpořená grantem $7 D013485
700    1_
$a Odermatt, Nina $u Microbial Ecology Group, CNR-Institute of Ecosystem Study, Largo Tonolli 50, 28922 Verbania, Italy ; Limnological Station, Institute of Plant Biology, University of Zurich, Seestrasse 187, 8802 Kilchberg, Switzerland.
700    1_
$a Salcher, Michaela M $u Limnological Station, Institute of Plant Biology, University of Zurich, Seestrasse 187, 8802 Kilchberg, Switzerland ; Institute of Hydrobiology, Biology Centre CAS, Na Sádkách 7, 370 05 České Budějovice, Czech Republic.
700    1_
$a Pernthaler, Jakob $u Limnological Station, Institute of Plant Biology, University of Zurich, Seestrasse 187, 8802 Kilchberg, Switzerland.
700    1_
$a Corno, Gianluca $u Microbial Ecology Group, CNR-Institute of Ecosystem Study, Largo Tonolli 50, 28922 Verbania, Italy.
773    0_
$w MED00188733 $t Archaea $x 1472-3654 $g Roč. 2015, č. - (2015), s. 590434
856    41
$u https://pubmed.ncbi.nlm.nih.gov/26379473 $y Pubmed
910    __
$a ABA008 $b sig $c sign $y a $z 0
990    __
$a 20160108 $b ABA008
991    __
$a 20160516100635 $b ABA008
999    __
$a ok $b bmc $g 1102311 $s 924236
BAS    __
$a 3
BAS    __
$a PreBMC
BMC    __
$a 2015 $b 2015 $c - $d 590434 $e 20150825 $i 1472-3654 $m Archaea $n Archaea $x MED00188733
LZP    __
$a Pubmed-20160108

Find record

Citation metrics

Loading data ...

Archiving options

Loading data ...