-
Je něco špatně v tomto záznamu ?
Multilocus Sequence Typing of Cronobacter Strains Isolated from Retail Foods and Environmental Samples
J. Killer, E. Skřivanová, I. Hochel, M. Marounek,
Jazyk angličtina Země Spojené státy americké
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
25974656
DOI
10.1089/fpd.2014.1884
Knihovny.cz E-zdroje
- MeSH
- bakteriální proteiny genetika metabolismus MeSH
- Cronobacter sakazakii klasifikace izolace a purifikace metabolismus MeSH
- Cronobacter klasifikace izolace a purifikace metabolismus MeSH
- enterobakteriální infekce mikrobiologie MeSH
- fylogeneze MeSH
- lidé MeSH
- mikrobiologie životního prostředí * MeSH
- molekulární typizace MeSH
- multilokusová sekvenční typizace MeSH
- polymerázová řetězová reakce s reverzní transkripcí MeSH
- potravinářská mikrobiologie * MeSH
- prach * MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Geografické názvy
- Česká republika MeSH
Cronobacter spp. are bacterial pathogens that affect children and immunocompromised adults. In this study, we used multilocus sequence typing (MLST) to determine sequence types (STs) in 11 Cronobacter spp. strains isolated from retail foods, 29 strains from dust samples obtained from vacuum cleaners, and 4 clinical isolates. Using biochemical tests, species-specific polymerase chain reaction, and MLST analysis, 36 strains were identified as Cronobacter sakazakii, and 6 were identified as Cronobacter malonaticus. In addition, one strain that originated from retail food and one from a dust sample from a vacuum cleaner were identified on the basis of MLST analysis as Cronobacter dublinensis and Cronobacter turicensis, respectively. Cronobacter spp. strains isolated from the retail foods were assigned to eight different MLST sequence types, seven of which were newly identified. The strains isolated from the dust samples were assigned to 7 known STs and 14 unknown STs. Three clinical isolates and one household dust isolate were assigned to ST4, which is the predominant ST associated with neonatal meningitis. One clinical isolate was classified based on MLST analysis as Cronobacter malonaticus and belonged to an as-yet-unknown ST. Three strains isolated from the household dust samples were assigned to ST1, which is another clinically significant ST. It can be concluded that Cronobacter spp. strains of different origin are genetically quite variable. The recovery of C. sakazakii strains belonging to ST1 and ST4 from the dust samples suggests the possibility that contamination could occur during food preparation. All of the novel STs and alleles for C. sakazakii, C. malonaticus, C. dublinensis, and C. turicensis determined in this study were deposited in the Cronobacter MLST database available online ( http://pubmlst.org/cronobacter/).
Citace poskytuje Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc16010196
- 003
- CZ-PrNML
- 005
- 20160413114758.0
- 007
- ta
- 008
- 160408s2015 xxu f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1089/fpd.2014.1884 $2 doi
- 024 7_
- $a 10.1089/fpd.2014.1884 $2 doi
- 035 __
- $a (PubMed)25974656
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a xxu
- 100 1_
- $a Killer, Jiří $u 1 Institute of Animal Physiology and Genetics , Academy of Sciences of the Czech Republic, Prague, Czech Republic . 2 Department of Microbiology, Nutrition, and Dietetics, Czech University of Life Sciences Prague , Prague, Czech Republic .
- 245 10
- $a Multilocus Sequence Typing of Cronobacter Strains Isolated from Retail Foods and Environmental Samples / $c J. Killer, E. Skřivanová, I. Hochel, M. Marounek,
- 520 9_
- $a Cronobacter spp. are bacterial pathogens that affect children and immunocompromised adults. In this study, we used multilocus sequence typing (MLST) to determine sequence types (STs) in 11 Cronobacter spp. strains isolated from retail foods, 29 strains from dust samples obtained from vacuum cleaners, and 4 clinical isolates. Using biochemical tests, species-specific polymerase chain reaction, and MLST analysis, 36 strains were identified as Cronobacter sakazakii, and 6 were identified as Cronobacter malonaticus. In addition, one strain that originated from retail food and one from a dust sample from a vacuum cleaner were identified on the basis of MLST analysis as Cronobacter dublinensis and Cronobacter turicensis, respectively. Cronobacter spp. strains isolated from the retail foods were assigned to eight different MLST sequence types, seven of which were newly identified. The strains isolated from the dust samples were assigned to 7 known STs and 14 unknown STs. Three clinical isolates and one household dust isolate were assigned to ST4, which is the predominant ST associated with neonatal meningitis. One clinical isolate was classified based on MLST analysis as Cronobacter malonaticus and belonged to an as-yet-unknown ST. Three strains isolated from the household dust samples were assigned to ST1, which is another clinically significant ST. It can be concluded that Cronobacter spp. strains of different origin are genetically quite variable. The recovery of C. sakazakii strains belonging to ST1 and ST4 from the dust samples suggests the possibility that contamination could occur during food preparation. All of the novel STs and alleles for C. sakazakii, C. malonaticus, C. dublinensis, and C. turicensis determined in this study were deposited in the Cronobacter MLST database available online ( http://pubmlst.org/cronobacter/).
- 650 _2
- $a bakteriální proteiny $x genetika $x metabolismus $7 D001426
- 650 _2
- $a Cronobacter $x klasifikace $x izolace a purifikace $x metabolismus $7 D059126
- 650 _2
- $a Cronobacter sakazakii $x klasifikace $x izolace a purifikace $x metabolismus $7 D044083
- 650 12
- $a prach $7 D004391
- 650 _2
- $a enterobakteriální infekce $x mikrobiologie $7 D004756
- 650 12
- $a mikrobiologie životního prostředí $7 D004783
- 650 12
- $a potravinářská mikrobiologie $7 D005516
- 650 _2
- $a lidé $7 D006801
- 650 _2
- $a molekulární typizace $7 D058889
- 650 _2
- $a multilokusová sekvenční typizace $7 D058885
- 650 _2
- $a fylogeneze $7 D010802
- 650 _2
- $a polymerázová řetězová reakce s reverzní transkripcí $7 D020133
- 651 _2
- $a Česká republika $7 D018153
- 655 _2
- $a časopisecké články $7 D016428
- 655 _2
- $a práce podpořená grantem $7 D013485
- 700 1_
- $a Skřivanová, Eva $u 2 Department of Microbiology, Nutrition, and Dietetics, Czech University of Life Sciences Prague , Prague, Czech Republic .
- 700 1_
- $a Hochel, Igor $u 3 Department of Biochemistry and Microbiology, University of Chemistry and Technology , Prague, Czech Republic .
- 700 1_
- $a Marounek, Milan $u 2 Department of Microbiology, Nutrition, and Dietetics, Czech University of Life Sciences Prague , Prague, Czech Republic . 4 Institute of Animal Science , Prague, Czech Republic .
- 773 0_
- $w MED00182959 $t Foodborne pathogens and disease $x 1556-7125 $g Roč. 12, č. 6 (2015), s. 514-21
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/25974656 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y a $z 0
- 990 __
- $a 20160408 $b ABA008
- 991 __
- $a 20160413114842 $b ABA008
- 999 __
- $a ok $b bmc $g 1113625 $s 934564
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2015 $b 12 $c 6 $d 514-21 $e 20150514 $i 1556-7125 $m Foodborne pathogens and disease $n Foodborne Pathog Dis $x MED00182959
- LZP __
- $a Pubmed-20160408