-
Je něco špatně v tomto záznamu ?
Formation of chelate structure between His-Met dipeptide and diaqua-cisplatin complex; DFT/PCM computational study
M. Maixner, HF. Dos Santos, JV. Burda,
Jazyk angličtina Země Německo
Typ dokumentu časopisecké články, práce podpořená grantem
- MeSH
- chelátory chemie MeSH
- cisplatina chemie MeSH
- dipeptidy chemie MeSH
- histidin chemie MeSH
- kinetika MeSH
- methionin chemie MeSH
- protinádorové látky chemie MeSH
- teorie funkcionálu hustoty * MeSH
- termodynamika MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
Interaction of cisplatin in activated diaqua-form with His-Met dipeptide is explored using DFT approach with PCM model. First the conformation space of the dipeptide is explored to find the most stable structure (labeled 0683). Several functionals with double-zeta basis set are used for optimization and obtained order of conformers is confirmed by the CCSD(T) single-point calculations. Supermolecular model is used to determine reaction coordinate for the replacement of aqua ligands consequently by N-site of histidine and S-site of methionine and reversely. Despite the monoadduct of Pt-S(Met) is thermodynamically less stable this reaction passes substantially faster (by several orders of magnitude) than coordination of cisplatin to histidine. The consequent chelate formation occurs relatively fast with energy release up to 12 kcal mol-1.
Citace poskytuje Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc19028583
- 003
- CZ-PrNML
- 005
- 20190823101247.0
- 007
- ta
- 008
- 190813s2018 gw f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1007/s00775-018-1536-x $2 doi
- 035 __
- $a (PubMed)29423565
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a gw
- 100 1_
- $a Maixner, Michal $u Department of Chemical Physics and Optics, Faculty of Mathematics and Physics, Charles University, Ke Karlovu 3, 121 16, Prague 2, Czech Republic.
- 245 10
- $a Formation of chelate structure between His-Met dipeptide and diaqua-cisplatin complex; DFT/PCM computational study / $c M. Maixner, HF. Dos Santos, JV. Burda,
- 520 9_
- $a Interaction of cisplatin in activated diaqua-form with His-Met dipeptide is explored using DFT approach with PCM model. First the conformation space of the dipeptide is explored to find the most stable structure (labeled 0683). Several functionals with double-zeta basis set are used for optimization and obtained order of conformers is confirmed by the CCSD(T) single-point calculations. Supermolecular model is used to determine reaction coordinate for the replacement of aqua ligands consequently by N-site of histidine and S-site of methionine and reversely. Despite the monoadduct of Pt-S(Met) is thermodynamically less stable this reaction passes substantially faster (by several orders of magnitude) than coordination of cisplatin to histidine. The consequent chelate formation occurs relatively fast with energy release up to 12 kcal mol-1.
- 650 _2
- $a protinádorové látky $x chemie $7 D000970
- 650 _2
- $a chelátory $x chemie $7 D002614
- 650 _2
- $a cisplatina $x chemie $7 D002945
- 650 12
- $a teorie funkcionálu hustoty $7 D000077318
- 650 _2
- $a dipeptidy $x chemie $7 D004151
- 650 _2
- $a histidin $x chemie $7 D006639
- 650 _2
- $a kinetika $7 D007700
- 650 _2
- $a methionin $x chemie $7 D008715
- 650 _2
- $a termodynamika $7 D013816
- 655 _2
- $a časopisecké články $7 D016428
- 655 _2
- $a práce podpořená grantem $7 D013485
- 700 1_
- $a Dos Santos, Helio F $u NEQC: Núcleo de Estudos em Química Computacional, Departamento de Química-ICE, Universidade Federal e Juiz de Fora, Juiz de Fora, MG, 36036-330, Brazil.
- 700 1_
- $a Burda, Jaroslav V $u Department of Chemical Physics and Optics, Faculty of Mathematics and Physics, Charles University, Ke Karlovu 3, 121 16, Prague 2, Czech Republic. burda@karlov.mff.cuni.cz.
- 773 0_
- $w MED00005752 $t Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry $x 1432-1327 $g Roč. 23, č. 3 (2018), s. 363-376
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/29423565 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y a $z 0
- 990 __
- $a 20190813 $b ABA008
- 991 __
- $a 20190823101502 $b ABA008
- 999 __
- $a ok $b bmc $g 1433732 $s 1067043
- BAS __
- $a 3
- BAS __
- $a PreBMC
- BMC __
- $a 2018 $b 23 $c 3 $d 363-376 $e 20180208 $i 1432-1327 $m JBIC, Journal of biological inorganic chemistry $n J Biol Inorg Chem $x MED00005752
- LZP __
- $a Pubmed-20190813