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Sequence typing of Haemophilus ducreyi isolated from patients in the Namatanai region of Papua New Guinea: Infections by Class I and Class II strain types differ in ulcer duration and resurgence of infection after azithromycin treatment
M. Medappa, P. Pospíšilová, LN. John, C. González-Beiras, M. Vall-Mayans, O. Mitjà, D. Šmajs
Language English Country United States
Document type Journal Article
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- MeSH
- Anti-Bacterial Agents * therapeutic use pharmacology MeSH
- Azithromycin * therapeutic use MeSH
- Child MeSH
- DNA, Bacterial genetics MeSH
- Adult MeSH
- Yaws microbiology epidemiology drug therapy MeSH
- Phylogeny MeSH
- Genotype * MeSH
- Haemophilus ducreyi * genetics isolation & purification drug effects MeSH
- Middle Aged MeSH
- Humans MeSH
- Chancroid * microbiology epidemiology drug therapy MeSH
- Adolescent MeSH
- Young Adult MeSH
- Pilot Projects MeSH
- Child, Preschool MeSH
- RNA, Ribosomal, 16S genetics MeSH
- Sequence Analysis, DNA MeSH
- Check Tag
- Child MeSH
- Adult MeSH
- Middle Aged MeSH
- Humans MeSH
- Adolescent MeSH
- Young Adult MeSH
- Male MeSH
- Child, Preschool MeSH
- Female MeSH
- Publication type
- Journal Article MeSH
- Geographicals
- Papua New Guinea MeSH
Haemophilus ducreyi (HD) is an important cause of cutaneous ulcers in several endemic regions, including the Western Pacific Region, especially among children. An HD sequence typing on swab samples taken from 1,081 ulcers in the Namatanai district of Papua New Guinea, during the pilot study for treatment of yaws, has been performed using the Grant typing system. Of the 363 samples that tested positive for the 16S rDNA of HD, the dsrA sequences of 270 samples were determined. Altogether they revealed 8 HD strain types circulating in Namatanai, including seven strain types of Class I (I.3, I.4, I.5, I.9, I.10, I.11, I.12) and one strain of Class II (II.3); four Class I types (I.9, I.10, I.11, I.12) were novel. The southern region of Namatanai (Matalai Rural) was identified as the region with the lowest genotype diversity and with most infections caused by HD Class II. The middle and northern subdistricts were affected mainly by HD Class I. Analysis of patient characteristics revealed that Class II HD infections were more often represented by longer-lasting ulcers than Class I HD infections. An increase in the prevalence of the I.10 strain was found after azithromycin administration compared to the untreated population at baseline likely reflecting higher infectivity of HD Class I, and more specifically strain type I.10.
Department of Biology Faculty of Medicine Masaryk University Brno Czech Republic
National Department of Health Aopi Centre Port Moresby Papua New Guinea
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