-
Je něco špatně v tomto záznamu ?
CryoEM structure and small-angle X-ray scattering analyses of porcine retinol-binding protein 3
V. Kaushik, L. Gessa, N. Kumar, M. Pinkas, M. Czarnocki-Cieciura, K. Palczewski, J. Nováček, H. Fernandes
Jazyk angličtina Země Anglie, Velká Británie
Typ dokumentu časopisecké články
Grantová podpora
PASIFIC
European Regional Development Fund
Foundation for Polish Science
NIH HHS - United States
MEYS CR
NLK
Directory of Open Access Journals
od 2011
Free Medical Journals
od 2011
Freely Accessible Science Journals
od 2011-09-01
PubMed Central
od 2011
Europe PubMed Central
od 2011
ProQuest Central
od 2024-01-01
Open Access Digital Library
od 2011-01-01
Open Access Digital Library
od 2011-01-01
ROAD: Directory of Open Access Scholarly Resources
od 2011
PubMed
39837501
DOI
10.1098/rsob.240180
Knihovny.cz E-zdroje
- MeSH
- difrakce rentgenového záření MeSH
- elektronová kryomikroskopie metody MeSH
- konformace proteinů MeSH
- maloúhlový rozptyl * MeSH
- molekulární modely MeSH
- oční proteiny MeSH
- prasata MeSH
- proteiny vázající retinol * chemie metabolismus MeSH
- simulace molekulového dockingu MeSH
- vazba proteinů MeSH
- vitamin A metabolismus chemie MeSH
- zvířata MeSH
- Check Tag
- zvířata MeSH
- Publikační typ
- časopisecké články MeSH
The vertebrate visual cycle hinges on enzymatically converting all-trans-retinol (at-ROL) into 11-cis-retinal (11c-RAL), the chromophore that binds to opsins in photoreceptors, forming light-responsive pigments. When struck by a photon, these pigments activate the phototransduction pathway and initiate the process of vision. The enzymatic isomerization of at-ROL, crucial for restoring the visual pigments and preparing them to receive new light stimuli, relies on various enzymes found in both the photoreceptors and retinal pigment epithelium cells. To function effectively, retinoids must shuttle between these two cell types. Retinol-binding protein 3 (RBP3), located in the interphotoreceptor matrix, probably plays a pivotal role in this transport mechanism. Comprised of four retinoid-binding modules, RBP3 also binds fatty acids, potentially aiding retinal function by facilitating the loading and unloading of different retinoids at specific cell types thereby directing the cycle. In this study, we present a 3.67 Å cryoEM structure of porcine RBP3, along with molecular docking analysis and corroborative in-solution small-angle X-ray scattering data for titration of RBP3 with relevant ligands, that also give insights on RBP3 conformational adaptability.
CEITEC Masaryk University Kamenice 5 Brno 62500 Czech Republic
Institute of Physical Chemistry Polish Academy of Sciences Warsaw Poland
Laboratory of Protein Structure International Institute of Molecular and Cell Biology Warsaw Poland
Citace poskytuje Crossref.org
- 000
- 00000naa a2200000 a 4500
- 001
- bmc25010387
- 003
- CZ-PrNML
- 005
- 20250429135431.0
- 007
- ta
- 008
- 250415s2025 enk f 000 0|eng||
- 009
- AR
- 024 7_
- $a 10.1098/rsob.240180 $2 doi
- 035 __
- $a (PubMed)39837501
- 040 __
- $a ABA008 $b cze $d ABA008 $e AACR2
- 041 0_
- $a eng
- 044 __
- $a enk
- 100 1_
- $a Kaushik, Vineeta $u Institute of Physical Chemistry, Polish Academy of Sciences , Warsaw, Poland
- 245 10
- $a CryoEM structure and small-angle X-ray scattering analyses of porcine retinol-binding protein 3 / $c V. Kaushik, L. Gessa, N. Kumar, M. Pinkas, M. Czarnocki-Cieciura, K. Palczewski, J. Nováček, H. Fernandes
- 520 9_
- $a The vertebrate visual cycle hinges on enzymatically converting all-trans-retinol (at-ROL) into 11-cis-retinal (11c-RAL), the chromophore that binds to opsins in photoreceptors, forming light-responsive pigments. When struck by a photon, these pigments activate the phototransduction pathway and initiate the process of vision. The enzymatic isomerization of at-ROL, crucial for restoring the visual pigments and preparing them to receive new light stimuli, relies on various enzymes found in both the photoreceptors and retinal pigment epithelium cells. To function effectively, retinoids must shuttle between these two cell types. Retinol-binding protein 3 (RBP3), located in the interphotoreceptor matrix, probably plays a pivotal role in this transport mechanism. Comprised of four retinoid-binding modules, RBP3 also binds fatty acids, potentially aiding retinal function by facilitating the loading and unloading of different retinoids at specific cell types thereby directing the cycle. In this study, we present a 3.67 Å cryoEM structure of porcine RBP3, along with molecular docking analysis and corroborative in-solution small-angle X-ray scattering data for titration of RBP3 with relevant ligands, that also give insights on RBP3 conformational adaptability.
- 650 _2
- $a zvířata $7 D000818
- 650 12
- $a maloúhlový rozptyl $7 D053838
- 650 _2
- $a prasata $7 D013552
- 650 12
- $a proteiny vázající retinol $x chemie $x metabolismus $7 D012177
- 650 _2
- $a elektronová kryomikroskopie $x metody $7 D020285
- 650 _2
- $a simulace molekulového dockingu $7 D062105
- 650 _2
- $a konformace proteinů $7 D011487
- 650 _2
- $a difrakce rentgenového záření $7 D014961
- 650 _2
- $a vazba proteinů $7 D011485
- 650 _2
- $a molekulární modely $7 D008958
- 650 _2
- $a vitamin A $x metabolismus $x chemie $7 D014801
- 650 _2
- $a oční proteiny $7 D005136
- 655 _2
- $a časopisecké články $7 D016428
- 700 1_
- $a Gessa, Luca $u Integrated Structural Biology Group, International Centre for Translational Eye Research, Institute of Physical Chemistry, Polish Academy of Sciences , Warsaw, Poland
- 700 1_
- $a Kumar, Nelam $u Integrated Structural Biology Group, International Centre for Translational Eye Research, Institute of Physical Chemistry, Polish Academy of Sciences , Warsaw, Poland
- 700 1_
- $a Pinkas, Matyáš $u CEITEC Masaryk University, Kamenice 5 , Brno 62500, Czech Republic
- 700 1_
- $a Czarnocki-Cieciura, Mariusz $u Laboratory of Protein Structure, International Institute of Molecular and Cell Biology , Warsaw, Poland
- 700 1_
- $a Palczewski, Krzysztof $u Departments of Ophthalmology, Chemistry, Physiology & Biophysics, and Molecular Biology & Biochemistry, Gavin Herbert Eye Institute-Center for Translational Vision Research, University of California , Irvine, CA 92697, USA
- 700 1_
- $a Nováček, Jiří $u CEITEC Masaryk University, Kamenice 5 , Brno 62500, Czech Republic
- 700 1_
- $a Fernandes, Humberto $u Institute of Physical Chemistry, Polish Academy of Sciences , Warsaw, Poland $u Integrated Structural Biology Group, International Centre for Translational Eye Research, Institute of Physical Chemistry, Polish Academy of Sciences , Warsaw, Poland $1 https://orcid.org/0000000209897593
- 773 0_
- $w MED00190574 $t Open biology $x 2046-2441 $g Roč. 15, č. 1 (2025), s. 240180
- 856 41
- $u https://pubmed.ncbi.nlm.nih.gov/39837501 $y Pubmed
- 910 __
- $a ABA008 $b sig $c sign $y - $z 0
- 990 __
- $a 20250415 $b ABA008
- 991 __
- $a 20250429135426 $b ABA008
- 999 __
- $a ok $b bmc $g 2311629 $s 1247468
- BAS __
- $a 3
- BAS __
- $a PreBMC-MEDLINE
- BMC __
- $a 2025 $b 15 $c 1 $d 240180 $e 20250122 $i 2046-2441 $m Open biology $n Open Biol $x MED00190574
- GRA __
- $p PASIFIC
- GRA __
- $p European Regional Development Fund
- GRA __
- $p Foundation for Polish Science
- GRA __
- $p NIH HHS $2 United States
- GRA __
- $p MEYS CR
- LZP __
- $a Pubmed-20250415