Genotyping microarray as a novel approach for the detection of ATP7B gene mutations in patients with Wilson disease
Jazyk angličtina Země Dánsko Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
18371106
DOI
10.1111/j.1399-0004.2008.00989.x
PII: CGE989
Knihovny.cz E-zdroje
- MeSH
- adenosintrifosfatasy genetika MeSH
- ATPasy transportující měď MeSH
- bodová mutace * MeSH
- detekce genetických nosičů metody MeSH
- genotyp MeSH
- hepatolentikulární degenerace diagnóza genetika MeSH
- heterozygot MeSH
- lidé MeSH
- mikročipová analýza přístrojové vybavení metody MeSH
- mutace MeSH
- mutační analýza DNA MeSH
- proteiny přenášející kationty genetika MeSH
- Check Tag
- lidé MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- adenosintrifosfatasy MeSH
- ATP7A protein, human MeSH Prohlížeč
- ATPasy transportující měď MeSH
- proteiny přenášející kationty MeSH
Wilson disease (WD) is an autosomal recessive inherited disorder of copper metabolism that is caused by mutations in the ATP7B gene. To date, more than 300 mutations have been described in this gene. Molecular diagnostics of WD utilizes restriction enzyme digestion, multiplex ligation-dependent probe amplification or a direct sequencing of the whole gene. To simplify and speed up the screening of ATP7B mutations, we have developed a genotyping microarray for the simultaneous detection of 87 mutations and 17 polymorphisms in the ATP7B gene based on the arrayed primer extension reaction. The patient's DNA is amplified in four multiplex polymerase chain reactions, fragmented products are annealed to arrayed primers spotted on a chip, which enables DNA polymerase extension reactions with fluorescently labeled dideoxynucleotides. The Wilson microarray was validated by screening 97 previously genetically confirmed WD patients. In total, we detected 43 mutations and 15 polymorphisms that represent a majority of the common mutations occurring in the Czech and Slovak populations. All screened sequence variants were detected with 100% accuracy. The Wilson chip appears to be a rapid, sensitive and cost-effective tool, representing the prototype of a disease chip that facilitates and speeds up the screening of potential WD patients.
Citace poskytuje Crossref.org
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