Functional analysis of the aglycone-binding site of the maize beta-glucosidase Zm-p60.1
Language English Country Great Britain, England Media print-electronic
Document type Journal Article, Research Support, Non-U.S. Gov't
PubMed
19016858
DOI
10.1111/j.1742-4658.2008.06735.x
PII: EJB6735
Knihovny.cz E-resources
- MeSH
- Amino Acids analysis MeSH
- beta-Glucosidase chemistry metabolism MeSH
- Brassica napus enzymology MeSH
- Escherichia coli enzymology genetics MeSH
- Phylogeny MeSH
- Catalytic Domain MeSH
- Kinetics MeSH
- Protein Conformation MeSH
- Zea mays enzymology MeSH
- Models, Molecular MeSH
- Recombinant Proteins chemistry metabolism MeSH
- Plant Proteins chemistry classification metabolism MeSH
- Plants classification enzymology MeSH
- Substrate Specificity MeSH
- Binding Sites MeSH
- Publication type
- Journal Article MeSH
- Research Support, Non-U.S. Gov't MeSH
- Names of Substances
- Amino Acids MeSH
- beta-Glucosidase MeSH
- Recombinant Proteins MeSH
- Plant Proteins MeSH
Beta-glucosidases such as Zm-p60.1 (Zea mays) and Bgl4:1 (Brassica napus) have implicated roles in regulating plant development by releasing biologically active cytokinins from O-glucosides. A key determinant of substrate specificity in Zm-p60.1 is the F193-F200-W373-F461 cluster. However, despite sharing the same substrates, amino acids in the active sites of Zm-p60.1 and Bgl4:1 differ dramatically. In members of the Brassicaceae we found a group of beta-glucosidases sharing both high similarity to Bgl4:1 and a consensus motif A-K-K-L corresponding to the F193-F200-W373-F461 cluster. To study the mechanism of substrate specificity further, we generated and analyzed four single (F193A, F200K, W373K and F461L) and one quadruple (F193A-F200K-W373K-F461L) mutants of Zm-p60.1. The F193A mutant showed a specific increase in affinity for a small polar aglycone, and a deep decrease in k(cat) compared with the wild-type. Formation of a cavity with decreased hydrophobicity, and significant consequent alterations in ratios of reactive and non-reactive complexes, revealed by computer modeling, may explain the observed changes in kinetic parameters of the F193 mutant. The large decrease in k(cat) for the W373K mutant was unexpected, but the findings are consistent with the F193-aglycone-W373 interaction playing a dual role in the enzyme's catalytic action; influencing both substrate specificity, and the catalytic rate by fixing the glucosidic bond in a favorable orientation for attack by the catalytic pair. Investigation of the combined effects of all of the mutations in the quadruple mutant of Zm-p60.1 was precluded by extensive alterations in its structure and almost complete abolition of its enzymatic activity.
References provided by Crossref.org
An automated method to evaluate the enzyme kinetics of β-glucosidases
Combining rational and random strategies in β-glucosidase Zm-p60.1 protein library construction