Identification of multiple substrates of the StkP Ser/Thr protein kinase in Streptococcus pneumoniae
Jazyk angličtina Země Spojené státy americké Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
20453092
PubMed Central
PMC2897338
DOI
10.1128/jb.01564-09
PII: JB.01564-09
Knihovny.cz E-zdroje
- MeSH
- bakteriální proteiny genetika metabolismus MeSH
- buněčné dělení fyziologie MeSH
- klonování DNA MeSH
- protein-serin-threoninkinasy genetika metabolismus MeSH
- regulace genové exprese enzymů fyziologie MeSH
- regulace genové exprese u bakterií fyziologie MeSH
- Streptococcus pneumoniae enzymologie MeSH
- substrátová specifita MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- bakteriální proteiny MeSH
- protein-serin-threoninkinasy MeSH
Monitoring the external environment and responding to its changes are essential for the survival of all living organisms. The transmission of extracellular signals in prokaryotes is mediated mainly by two-component systems. In addition, genomic analyses have revealed that many bacteria contain eukaryotic-type Ser/Thr protein kinases. The human pathogen Streptococcus pneumoniae encodes 13 two-component systems and has a single copy of a eukaryotic-like Ser/Thr protein kinase gene designated stkP. Previous studies demonstrated the pleiotropic role of the transmembrane protein kinase StkP in pneumococcal physiology. StkP regulates virulence, competence, and stress resistance and plays a role in the regulation of gene expression. To determine the intracellular signaling pathways controlled by StkP, we used a proteomic approach for identification of its substrates. We detected six proteins phosphorylated on threonine by StkP continuously during growth. We identified three new substrates of StkP: the Mn-dependent inorganic pyrophosphatase PpaC, the hypothetical protein spr0334, and the cell division protein DivIVA. Contrary to the results of a previous study, we did not confirm that the alpha-subunit of RNA polymerase is a target of StkP. We showed that StkP activation and substrate recognition depend on the presence of a peptidoglycan-binding domain comprising four extracellular penicillin-binding protein- and Ser/Thr kinase-associated domain (PASTA domain) repeats. We found that StkP is regulated in a growth-dependent manner and likely senses intracellular peptidoglycan subunits present in the cell division septa. In addition, stkP inactivation results in cell division defects. Thus, the data presented here suggest that StkP plays an important role in the regulation of cell division in pneumococcus.
Zobrazit více v PubMed
Absalon, C., M. Obuchowski, E. Madec, D. Delattre, I. B. Holland, and S. J. Seror. 2009. CpgA, EF-Tu and the stressosome protein YezB are substrates of the Ser/Thr kinase/phosphatase couple, PrkC/PrpC, in Bacillus subtilis. Microbiology 155:932-943. PubMed
Avery, O. T., C. M. McLeod, and M. McCarthy. 1944. Studies on the chemical nature of the substance inducing transformation of pneumococcal types. J. Exp. Med. 79:137-158. PubMed PMC
Av-Gay, Y., S. Jamil, and S. J. Drews. 1999. Expression and characterization of the Mycobacterium tuberculosis serine/threonine protein kinase PknB. Infect. Immun. 67:5676-5682. PubMed PMC
Beltramini, A. M., C. D. Mukhopadhyay, and V. Pancholi. 2009. Modulation of cell wall structure and antimicrobial susceptibility by a Staphylococcus aureus eukaryote-like serine/threonine kinase and phosphatase. Infect. Immun. 77:1406-1416. PubMed PMC
Canova, M. J., L. Kremer, and V. Molle. 2008. pETPhos: a customized expression vector designed for further characterization of Ser/Thr/Tyr protein kinases and their substrates. Plasmid 60:149-153. PubMed
Canova, M. J., L. Kremer, and V. Molle. 2009. The Mycobacterium tuberculosis GroEL1 chaperone is a substrate of Ser/Thr protein kinases. J. Bacteriol. 191:2876-2883. PubMed PMC
Claverys, J. P., A. Dintilhac, E. V. Pestova, B. Martin, and D. A. Morrison. 1995. Construction and evaluation of new drug-resistance cassettes for gene disruption mutagenesis in Streptococcus pneumoniae, using an ami test platform. Gene 164:123-128. PubMed
Debarbouille, M., S. Dramsi, O. Dussurget, M. A. Nahori, E. Vaganay, G. Jouvion, A. Cozzone, T. Msadek, and B. Duclos. 2009. Characterization of a serine/threonine kinase involved in virulence of Staphylococcus aureus. J. Bacteriol. 191:4070-4081. PubMed PMC
Echenique, J., A. Kadioglu, S. Romao, P. W. Andrew, and M. C. Trombe. 2004. Protein serine/threonine kinase StkP positively controls virulence and competence in Streptococcus pneumoniae. Infect. Immun. 72:2434-2437. PubMed PMC
Errington, J., R. A. Daniel, and D. J. Scheffers. 2003. Cytokinesis in bacteria. Microbiol. Mol. Biol. Rev. 67:52-65, table. PubMed PMC
Fadda, D., C. Pischedda, F. Caldara, M. B. Whalen, D. Anderluzzi, E. Domenici, and O. Massidda. 2003. Characterization of divIVA and other genes located in the chromosomal region downstream of the dcw cluster in Streptococcus pneumoniae. J. Bacteriol. 185:6209-6214. PubMed PMC
Fadda, D., A. Santona, V. D'Ulisse, P. Ghelardini, M. G. Ennas, M. B. Whalen, and O. Massidda. 2007. Streptococcus pneumoniae DivIVA: localization and interactions in a MinCD-free context. J. Bacteriol. 189:1288-1298. PubMed PMC
Fernandez, P., B. Saint-Joanis, N. Barilone, M. Jackson, B. Gicquel, S. T. Cole, and P. M. Alzari. 2006. The Ser/Thr protein kinase PknB is essential for sustaining mycobacterial growth. J. Bacteriol. 188:7778-7784. PubMed PMC
Fiuza, M., M. J. Canova, D. Patin, M. Letek, I. Zanella-Cleon, M. Becchi, L. M. Mateos, D. Mengin-Lecreulx, V. Molle, and J. A. Gil. 2008. The MurC ligase essential for peptidoglycan biosynthesis is regulated by the serine/threonine protein kinase PknA in Corynebacterium glutamicum. J. Biol. Chem. 283:36553-36563. PubMed PMC
Fiuza, M., M. J. Canova, I. Zanella-Cleon, M. Becchi, A. J. Cozzone, L. M. Mateos, L. Kremer, J. A. Gil, and V. Molle. 2008. From the characterization of the four serine/threonine protein kinases (PknA/B/G/L) of Corynebacterium glutamicum toward the role of PknA and PknB in cell division. J. Biol. Chem. 283:18099-18112. PubMed
Gaidenko, T. A., T. J. Kim, and C. W. Price. 2002. The PrpC serine-threonine phosphatase and PrkC kinase have opposing physiological roles in stationary-phase Bacillus subtilis cells. J. Bacteriol. 184:6109-6114. PubMed PMC
Giefing, C., A. L. Meinke, M. Hanner, T. Henics, M. D. Bui, D. Gelbmann, U. Lundberg, B. M. Senn, M. Schunn, A. Habel, B. Henriques-Normark, A. Ortqvist, M. Kalin, A. von Gabain, and E. Nagy. 2008. Discovery of a novel class of highly conserved vaccine antigens using genomic scale antigenic fingerprinting of pneumococcus with human antibodies. J. Exp. Med. 205:117-131. PubMed PMC
Gordon, E., N. Mouz, E. Duee, and O. Dideberg. 2000. The crystal structure of the penicillin-binding protein 2x from Streptococcus pneumoniae and its acyl-enzyme form: implication in drug resistance. J. Mol. Biol. 299:477-485. PubMed
Hanks, S. K., A. M. Quinn, and T. Hunter. 1988. The protein kinase family: conserved features and deduced phylogeny of the catalytic domains. Science 241:42-52. PubMed
Hussain, H., P. Branny, and E. Allan. 2006. A eukaryotic-type serine/threonine protein kinase is required for biofilm formation, genetic competence, and acid resistance in Streptococcus mutans. J. Bacteriol. 188:1628-1632. PubMed PMC
Jin, H., and V. Pancholi. 2006. Identification and biochemical characterization of a eukaryotic-type serine/threonine kinase and its cognate phosphatase in Streptococcus pyogenes: their biological functions and substrate identification. J. Mol. Biol. 357:1351-1372. PubMed
Jones, G., and P. Dyson. 2006. Evolution of transmembrane protein kinases implicated in coordinating remodeling of gram-positive peptidoglycan: inside versus outside. J. Bacteriol. 188:7470-7476. PubMed PMC
Kang, C. M., D. W. Abbott, S. T. Park, C. C. Dascher, L. C. Cantley, and R. N. Husson. 2005. The Mycobacterium tuberculosis serine/threonine kinases PknA and PknB: substrate identification and regulation of cell shape. Genes Dev. 19:1692-1704. PubMed PMC
Kristich, C. J., C. L. Wells, and G. M. Dunny. 2007. A eukaryotic-type Ser/Thr kinase in Enterococcus faecalis mediates antimicrobial resistance and intestinal persistence. Proc. Natl. Acad. Sci. U. S. A. 104:3508-3513. PubMed PMC
Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685. PubMed
Lahti, R. 1983. Microbial inorganic pyrophosphatases. Microbiol. Rev. 47:169-178. PubMed PMC
Levine, A., F. Vannier, C. Absalon, L. Kuhn, P. Jackson, E. Scrivener, V. Labas, J. Vinh, P. Courtney, J. Garin, and S. J. Seror. 2006. Analysis of the dynamic Bacillus subtilis Ser/Thr/Tyr phosphoproteome implicated in a wide variety of cellular processes. Proteomics 6:2157-2173. PubMed
Lin, W. J., D. Walthers, J. E. Connelly, K. Burnside, K. A. Jewell, L. J. Kenney, and L. Rajagopal. 2009. Threonine phosphorylation prevents promoter DNA binding of the group B Streptococcus response regulator CovR. Mol. Microbiol. 71:1477-1495. PubMed PMC
Macek, B., F. Gnad, B. Soufi, C. Kumar, J. V. Olsen, I. Mijakovic, and M. Mann. 2008. Phosphoproteome analysis of E. coli reveals evolutionary conservation of bacterial Ser/Thr/Tyr phosphorylation. Mol. Cell. Proteomics 7:299-307. PubMed
Macek, B., I. Mijakovic, J. V. Olsen, F. Gnad, C. Kumar, P. R. Jensen, and M. Mann. 2007. The serine/threonine/tyrosine phosphoproteome of the model bacterium Bacillus subtilis. Mol. Cell. Proteomics 6:697-707. PubMed
Madec, E., A. Laszkiewicz, A. Iwanicki, M. Obuchowski, and S. Seror. 2002. Characterization of a membrane-linked Ser/Thr protein kinase in Bacillus subtilis, implicated in developmental processes. Mol. Microbiol. 46:571-586. PubMed
Marston, A. L., and J. Errington. 1999. Selection of the midcell division site in Bacillus subtilis through MinD-dependent polar localization and activation of MinC. Mol. Microbiol. 33:84-96. PubMed
Molle, V., A. K. Brown, G. S. Besra, A. J. Cozzone, and L. Kremer. 2006. The condensing activities of the Mycobacterium tuberculosis type II fatty acid synthase are differentially regulated by phosphorylation. J. Biol. Chem. 281:30094-30103. PubMed
Morrison, D. A., S. A. Lacks, W. R. Guild, and J. M. Hageman. 1983. Isolation and characterization of three new classes of transformation-deficient mutants of Streptococcus pneumoniae that are defective in DNA transport and genetic recombination. J. Bacteriol. 156:281-290. PubMed PMC
Novakova, L., L. Saskova, P. Pallova, J. Janecek, J. Novotna, A. Ulrych, J. Echenique, M. C. Trombe, and P. Branny. 2005. Characterization of a eukaryotic type serine/threonine protein kinase and protein phosphatase of Streptococcus pneumoniae and identification of kinase substrates. FEBS J. 272:1243-1254. PubMed
Oliver, A. W., S. Knapp, and L. H. Pearl. 2007. Activation segment exchange: a common mechanism of kinase autophosphorylation? Trends Biochem. Sci. 32:351-356. PubMed
Pallova, P., K. Hercik, L. Saskova, L. Novakova, and P. Branny. 2007. A eukaryotic-type serine/threonine protein kinase StkP of Streptococcus pneumoniae acts as a dimer in vivo. Biochem. Biophys. Res. Commun. 355:526-530. PubMed
Perez, J., A. Castaneda-Garcia, H. Jenke-Kodama, R. Muller, and J. Munoz-Dorado. 2008. Eukaryotic-like protein kinases in the prokaryotes and the myxobacterial kinome. Proc. Natl. Acad. Sci. U. S. A. 105:15950-15955. PubMed PMC
Pike, A. C., P. Rellos, F. H. Niesen, A. Turnbull, A. W. Oliver, S. A. Parker, B. E. Turk, L. H. Pearl, and S. Knapp. 2008. Activation segment dimerization: a mechanism for kinase autophosphorylation of non-consensus sites. EMBO J. 27:704-714. PubMed PMC
Rais, I., M. Karas, and H. Schagger. 2004. Two-dimensional electrophoresis for the isolation of integral membrane proteins and mass spectrometric identification. Proteomics 4:2567-2571. PubMed
Rajagopal, L., A. Clancy, and C. E. Rubens. 2003. A eukaryotic type serine/threonine kinase and phosphatase in Streptococcus agalactiae reversibly phosphorylate an inorganic pyrophosphatase and affect growth, cell segregation, and virulence. J. Biol. Chem. 278:14429-14441. PubMed
Rajagopal, L., A. Vo, A. Silvestroni, and C. E. Rubens. 2005. Regulation of purine biosynthesis by a eukaryotic-type kinase in Streptococcus agalactiae. Mol. Microbiol. 56:1329-1346. PubMed PMC
Rajagopal, L., A. Vo, A. Silvestroni, and C. E. Rubens. 2006. Regulation of cytotoxin expression by converging eukaryotic-type and two-component signalling mechanisms in Streptococcus agalactiae. Mol. Microbiol. 62:941-957. PubMed PMC
Rantanen, M. K., L. Lehtio, L. Rajagopal, C. E. Rubens, and A. Goldman. 2007. Structure of the Streptococcus agalactiae family II inorganic pyrophosphatase at 2.80 A resolution. Acta Crystallogr. Sect. D Biol. Crystallogr. 63:738-743. PubMed PMC
Saskova, L., L. Novakova, M. Basler, and P. Branny. 2007. Eukaryotic-type serine/threonine protein kinase StkP is a global regulator of gene expression in Streptococcus pneumoniae. J. Bacteriol. 189:4168-4179. PubMed PMC
Schultz, C., A. Niebisch, A. Schwaiger, U. Viets, S. Metzger, M. Bramkamp, and M. Bott. 2009. Genetic and biochemical analysis of the serine/threonine protein kinases PknA, PknB, PknG and PknL of Corynebacterium glutamicum: evidence for non-essentiality and for phosphorylation of OdhI and FtsZ by multiple kinases. Mol. Microbiol. 74:724-741. PubMed PMC
Shah, I. M., M. H. Laaberki, D. L. Popham, and J. Dworkin. 2008. A eukaryotic-like Ser/Thr kinase signals bacteria to exit dormancy in response to peptidoglycan fragments. Cell 135:486-496. PubMed PMC
Sharma, K., M. Gupta, A. Krupa, N. Srinivasan, and Y. Singh. 2006. EmbR, a regulatory protein with ATPase activity, is a substrate of multiple serine/threonine kinases and phosphatase in Mycobacterium tuberculosis. FEBS J. 273:2711-2721. PubMed
Silvestroni, A., K. A. Jewell, W. J. Lin, J. E. Connelly, M. M. Ivancic, W. A. Tao, and L. Rajagopal. 2009. Identification of serine/threonine kinase substrates in the human pathogen group B streptococcus. J. Proteome Res. 8:2563-2574. PubMed PMC
Thakur, M., and P. K. Chakraborti. 2006. GTPase activity of mycobacterial FtsZ is impaired due to its transphosphorylation by the eukaryotic-type Ser/Thr kinase, PknA. J. Biol. Chem. 281:40107-40113. PubMed
Thakur, M., and P. K. Chakraborti. 2008. Ability of PknA, a mycobacterial eukaryotic-type serine/threonine kinase, to transphosphorylate MurD, a ligase involved in the process of peptidoglycan biosynthesis. Biochem. J. 415:27-33. PubMed
Ulijasz, A. T., S. P. Falk, and B. Weisblum. 2009. Phosphorylation of the RitR DNA-binding domain by a Ser-Thr phosphokinase: implications for global gene regulation in the streptococci. Mol. Microbiol. 71:382-390. PubMed
Williams, T. I., J. C. Combs, A. P. Thakur, H. J. Strobel, and B. C. Lynn. 2006. A novel Bicine running buffer system for doubled sodium dodecyl sulfate-polyacrylamide gel electrophoresis of membrane proteins. Electrophoresis 27:2984-2995. PubMed
Yeats, C., R. D. Finn, and A. Bateman. 2002. The PASTA domain: a beta-lactam-binding domain. Trends Biochem. Sci. 27:438. PubMed
Young, T. A., B. Delagoutte, J. A. Endrizzi, A. M. Falick, and T. Alber. 2003. Structure of Mycobacterium tuberculosis PknB supports a universal activation mechanism for Ser/Thr protein kinases. Nat. Struct. Biol. 10:168-174. PubMed
GpsB Coordinates StkP Signaling as a PASTA Kinase Adaptor in Streptococcus pneumoniae Cell Division
LocZ is a new cell division protein involved in proper septum placement in Streptococcus pneumoniae