High-resolution melting analysis of 15 genes in 60 patients with cytochrome-c oxidase deficiency
Jazyk angličtina Země Anglie, Velká Británie Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
22592081
DOI
10.1038/jhg.2012.49
PII: jhg201249
Knihovny.cz E-zdroje
- MeSH
- buněčné jádro genetika MeSH
- deficit cytochrom-c-oxidázy epidemiologie genetika patologie MeSH
- dítě MeSH
- endokrinní disruptory MeSH
- exony MeSH
- genetická predispozice k nemoci MeSH
- genetické testování metody MeSH
- genom lidský * MeSH
- genotypizační techniky metody MeSH
- heterozygot MeSH
- introny MeSH
- jednonukleotidový polymorfismus MeSH
- kojenec MeSH
- lidé MeSH
- missense mutace MeSH
- předškolní dítě MeSH
- respirační komplex IV genetika metabolismus MeSH
- senzitivita a specificita MeSH
- substituce aminokyselin MeSH
- výpočetní biologie metody MeSH
- Check Tag
- dítě MeSH
- kojenec MeSH
- lidé MeSH
- předškolní dítě MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Geografické názvy
- Česká republika epidemiologie MeSH
- Názvy látek
- COX4I2 protein, human MeSH Prohlížeč
- COX6A1 protein, human MeSH Prohlížeč
- COX7A1 protein, human MeSH Prohlížeč
- endokrinní disruptory MeSH
- respirační komplex IV MeSH
Cytochrome-c oxidase (COX) deficiency is one of the common childhood mitochondrial disorders. Mutations in genes for the assembly factors SURF1 and SCO2 are prevalent in children with COX deficiency in the Slavonic population. Molecular diagnosis is difficult because of the number of genes involved in COX biogenesis and assembly. The aim of this study was to screen for mutations in 15 nuclear genes that encode the 10 structural subunits, their isoforms and two assembly factors of COX in 60 unrelated Czech children with COX deficiency. Nine novel variants were identified in exons and adjacent intronic regions of COX4I2, COX6A1, COX6A2, COX7A1, COX7A2 and COX10 using high-resolution melting (HRM) analysis. Online bioinformatics servers were used to predict the importance of the newly identified amino-acid substitutions. The newly characterized variants updated the contemporary spectrum of known genetic sequence variations that are present in the Czech population, which will be important for further targeted mutation screening in Czech COX-deficient children. HRM and predictive bioinformatics methodologies are advantageous because they are low-cost screening tools that complement large-scale genomic studies and reduce the required time and effort.
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