Crystallization and preliminary X-ray crystallographic analysis of recombinant β-mannosidase from Aspergillus niger
Jazyk angličtina Země Anglie, Velká Británie Médium print-electronic
Typ dokumentu časopisecké články, práce podpořená grantem
PubMed
23519806
PubMed Central
PMC3606576
DOI
10.1107/s1744309113002522
PII: S1744309113002522
Knihovny.cz E-zdroje
- Klíčová slova
- Aspergillus niger, β-mannosidase,
- MeSH
- Aspergillus niger chemie enzymologie MeSH
- beta-mannosidasa chemie genetika MeSH
- fungální proteiny chemie genetika MeSH
- krystalizace MeSH
- krystalografie rentgenová MeSH
- mannosa chemie MeSH
- Pichia chemie genetika MeSH
- rekombinantní proteiny chemie genetika MeSH
- Publikační typ
- časopisecké články MeSH
- práce podpořená grantem MeSH
- Názvy látek
- beta-mannosidasa MeSH
- fungální proteiny MeSH
- mannosa MeSH
- rekombinantní proteiny MeSH
β-Mannosidase (EC 3.2.1.25) is an important exoglycosidase specific for the hydrolysis of terminal β-linked mannoside in various oligomeric saccharide structures. β-Mannosidase from Aspergillus niger was expressed in Pichia pastoris and purified to clear homogeneity. β-Mannosidase was crystallized in the presence of D-mannose and the crystal diffracted to 2.41 Å resolution. The crystal belonged to space group P1, with unit-cell parameters a=62.37, b=69.73, c=69.90 Å, α=108.20, β=101.51, γ=103.20°. The parameters derived from the data collection indicate the presence of one molecule in the asymmetric unit.
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Ademark, P., Lundqvist, J., Hägglund, P., Tenkanen, M., Torto, N., Tjerneld, F. & Stålbrand, H. (1999). J. Biotechnol. 75, 281–289. PubMed
Battye, T. G. G., Kontogiannis, L., Johnson, O., Powell, H. R. & Leslie, A. G. W. (2011). Acta Cryst. D67, 271–281. PubMed PMC
Beck, T., Krasauskas, A., Gruene, T. & Sheldrick, G. M. (2008). Acta Cryst. D64, 1179–1182. PubMed
van Bueren, A. L., Ghinet, M. G., Gregg, K., Fleury, A., Brzezinski, R. & Boraston, A. B. (2009). J. Mol. Biol. 385, 131–139. PubMed
Fliedrová, B., Gerstorferová, D., Křen, V. & Weignerová, L. (2012). Protein Expr. Purif. 85, 159–164. PubMed
Itoh, H. & Kamiyama, Y. (1995). J. Ferment. Bioeng. 80, 510–512.
Jain, S., Drendel, W. B., Chen, Z. W., Mathews, F. S., Sly, W. S. & Grubb, J. H. (1996). Nature Struct. Biol. 3, 375–381. PubMed
Kabsch, W. (2010). Acta Cryst. D66, 125–132. PubMed PMC
Matthews, B. W. (1968). J. Mol. Biol. 33, 491–497. PubMed
Moreira, L. R. & Filho, E. X. (2008). Appl. Microbiol. Biotechnol. 79, 165–178. PubMed
Mueller, U., Darowski, N., Fuchs, M. R., Förster, R., Hellmig, M., Paithankar, K. S., Pühringer, S., Steffien, M., Zocher, G. & Weiss, M. S. (2012). J. Synchrotron Rad. 19, 442–449. PubMed PMC
Murshudov, G. N., Skubák, P., Lebedev, A. A., Pannu, N. S., Steiner, R. A., Nicholls, R. A., Winn, M. D., Long, F. & Vagin, A. A. (2011). Acta Cryst. D67, 355–367. PubMed PMC
Nashiru, O., Zechel, D. L., Stoll, D., Mohammadzadeh, T., Warren, R. A. J. & Withers, S. G. (2001). Angew. Chem. Int. Ed. 40, 417–420. PubMed
Skálová, T., Dohnálek, J., Spiwok, V., Lipovová, P., Vondrácková, E., Petroková, H., Dusková, J., Strnad, H., Králová, B. & Hasek, J. (2005). J. Mol. Biol. 353, 282–294. PubMed
Tailford, L. E., Money, V. A., Smith, N. L., Dumon, C., Davies, G. J. & Gilbert, H. J. (2007). J. Biol. Chem. 282, 11291–11299. PubMed
Tailford, L. E., Offen, W. A., Smith, N. L., Dumon, C., Morland, C., Gratien, J., Heck, M. P., Stick, R. V., Blériot, Y., Vasella, A., Gilbert, H. J. & Davies, G. J. (2008). Nature Chem. Biol. 4, 306–312. PubMed
Vagin, A. & Teplyakov, A. (2010). Acta Cryst. D66, 22–25. PubMed
Winn, M. D. et al. (2011). Acta Cryst. D67, 235–242. PubMed